Sequence detailsbmy_02969 (Coding sequence)

Part of scaffold_83 (SequenceType object (1))

For more information consult the page for scaffold_83 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CARFENSTTRG00000006016 (Bottlenosed dolphin)

Gene Details

calcium responsive transcription factor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005680, Bottlenosed dolphin)

Protein Percentage 82.04%
cDNA percentage 85.37%
Ka/Ks Ratio 0.53389 (Ka = 0.0967, Ks = 0.1812)

BT.37093ENSBTAG00000016000 (Cow)

Gene Details

amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 protein homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021288, Cow)

Protein Percentage 76.99%
cDNA percentage 82.44%
Ka/Ks Ratio 0.45131 (Ka = 0.1645, Ks = 0.3645)

Additional orthologs identified in other species via the OPTIC pipeline.

CARF (Human)   Carf (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1623 bp    Location:1079062..1047715   Strand:-
Raw sequence 
>bmy_02969
ATGGAACAGTCTGTTGATTCATTAAGAGTCAACCATAATGATTCTGAAGAGTCAAAAACCGATTCTCAGCATCTAAGCTGTATGGACTCCAGTGAGCCTTCTTTTGGACAAGATGGTTCCCCTAGAGTTTTACCCATTACTACTGCAGTGGATAATTCACTCACATCACAGAATATACCAGGGCCCCTGACTCAGACACAGACTCTTTCTGCAGAGCAATTCCACCTAGTGGACCAAAATGGGCAACCTATTCAATATGAGCTTCAGTCATTGGGGGATTCTAATGCGCAAATGATGATTGTTGCCAGCCCATCAGAAAATGGACAGGTGCTGCGAGTAATTCCATCTACCCAGACAGGAACGACACAAGTGATTGTACCTCAGGGGCAGCTTGTGGATGTGAATAGTCCTCAGGATGTCTCTGAAGAGAAACCCAGTGACAGAAACTTACCAACTGTAAGAGTGGATTCTCTAGCAGACAATAACAGTAGTTACATTCTTCATCCACAAGCATCCCTCACATTGCCCAAAAAGACAGTGACCAGAATACTTGAAGAACCTTTTTTGGCTCCACTCCAGCCACTTTCTTCTAACACACCTATATGGGCCTGTCGTCTTAGGAGCTGTGAGGACATTATCACTGTTGTTGCTTTTCTTAGTGTTATGTACGTATGGAGTAGAGCTGTGGTAATGGAGTGTCAGTATGGGCCAAGAAGAAAAGGTTTCCAGTTAAAAAAAATCAGTGAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCTACTTGTCCAGCCCGGATTTACATAAAAAAGGTACAGAAATTTCCTGAATATAGAGTTCCTACAGACCCCAAAATTGACAGGAAAATAATCCGAACGGAGCAGGAAAAAGCCTTTAACATGCTAAAGAAGAACTTGGTAGATGCTGGTGGTGTTCTTAGGTGGTATGTACAGTTACCTACGCAGCAAGCTCATCAGTATCACGAATTAGAGACTCCCTGCCTCCCTTTATCACCTTCCTCTTTTCCTATGTCTTCTCTTGAAGAAGAGGAAACTGCAGTTAGAGATGAGAACTGTGCATTACCCTCACGTCTACATCCTCAAGTAGCACATAAAATTCAAGAATTAGTATCACAGGGAATACAACAAGTGTATGCAGTAAGGAAACAGCTAAGAAAATTTGTGGAAAGGGAACTGTTCAAACCTGATGAGGTACCTGAAAGACATAATTTATCCTTTTTTCCAACTGTAAATGATATAAAAAATCACATCCATGAGGTACAGAAATCCTTGAGAAATGGAGATAATGTATATAACTCAGAGATTATTCCAGCAACGGGGAGAGAAAAAGATCCTGAGATCGAGTTTGGAAAAGCGAAATTCACAAGGAGAAGCAATTTCCAGCAGAGTGGAAACAAATCAGACAAGGGGTTCTTTGTCTCCAGAGCCAGCGCACTTGCTGTCCTCACTTTCTTCATTTCAGCCAAAAATATTCACACAACTACAGTTGAAGAAAGTCCAGAAGGTACCATTTCTGTGAACCAAGTTAAGCAAGAACCCAAAGAACCAGCATTATCTATGGAAGCAAAAAAAAATTTGGACTGTAAGAAATTGTCTGCTACATAA

Related Sequences

bmy_02969T0 SequenceType object (3)

Length: 541 aa      View alignments
>bmy_02969T0
MEQSVDSLRVNHNDSEESKTDSQHLSCMDSSEPSFGQDGSPRVLPITTAVDNSLTSQNIPGPLTQTQTLSAEQFHLVDQNGQPIQYELQSLGDSNAQMMIVASPSENGQVLRVIPSTQTGTTQVIVPQGQLVDVNSPQDVSEEKPSDRNLPTVRVDSLADNNSSYILHPQASLTLPKKTVTRILEEPFLAPLQPLSSNTPIWACRLRSCEDIITVVAFLSVMYVWSRAVVMECQYGPRRKGFQLKKISEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDRKIIRTEQEKAFNMLKKNLVDAGGVLRWYVQLPTQQAHQYHELETPCLPLSPSSFPMSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIQQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSLRNGDNVYNSEIIPATGREKDPEIEFGKAKFTRRSNFQQSGNKSDKGFFVSRASALAVLTFFISAKNIHTTTVEESPEGTISVNQVKQEPKEPALSMEAKKNLDCKKLSAT*