Sequence detailsbmy_02972 (Coding sequence)

Part of scaffold_83 (SequenceType object (1))

For more information consult the page for scaffold_83 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM117BENSTTRG00000001227 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 117, member B

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001153, Bottlenosed dolphin)

Protein Percentage 79.94%
cDNA percentage 83.49%
Ka/Ks Ratio 0.6644 (Ka = 0.1697, Ks = 0.2554)

BT.73998ENSBTAG00000018746 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024963, Cow)

Protein Percentage 79.64%
cDNA percentage 81.36%
Ka/Ks Ratio 0.41333 (Ka = 0.1668, Ks = 0.4036)

FAM117B (Minke Whale)

Gene Details

family with sequence similarity 117, member B

External Links

Gene match (Identifier: BACU014138, Minke Whale)

Protein Percentage 88.73%
cDNA percentage 91.14%
Ka/Ks Ratio 0.78611 (Ka = 0.0896, Ks = 0.114)

Additional orthologs identified in other species via the OPTIC pipeline.

FAM117B (Human)   Fam117b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1719 bp    Location:1289154..1207455   Strand:-
Raw sequence 
>bmy_02972
ATGAGGGCTACGGTTCCGTTCCAGCTGAAGCAGCAGCAGCAGCAACATGGCAGCCCCACGCGGAGCAACGGCGGCGGCGGCGGCAACAACGGCGGCTGCTGTGGTGGCGCCTCAGGCCCCTCGGGCGGCGGCGGCAGCAGCGGGGCCCCGCGCACCGCCTCGCGCAGCACAAGCCCCACGCGGGGCGGCGGGAGTGCGGCCGCGCGCACCAGCCCCACGGTGGCCACGCAGACGGGCGCGTCCTCGACGTCCACGCGAGGCACCAGCCCCACGCGCGGCGCCGCGCCCGGGGCCCGCGGGAGCCCCCCACGGCCGCAGCCCCCGCCGCCGCTGCTGGGCACCGTGTCGTCGCCTTCCTCGTCGCCCACCCACCTGTGGACAGGCGAGGTGAGCGCGGCCCCACCCGCAGCCCGCGTCCGGCACCGGAGGAGGTCCCCGGAGCAGAGCCGAAGCTCCCCGGAGAGGAGGAGCCCGAGCGCCCCTCTTTGCAAAGCAGGTGACAAAGCAAGACCGCCTTCCTCCAGCCCCTCTAGCATCATCCGCCGTACCTCCTCCCTGGATACACTTGCTGCTCCGTACCTTGCAGGGCACTGGCCTCGTGATGGTCATGGGCAAGCTGCTCCTTGCATGCGGGACAAGGCCACACAGATTGCAAAATTACGCCAGCAATTGCAGAGAAGTAAACACAGCAGTCGGCATCATCGAGATAAAGAAAGACAGTCTCCATTCCATGGCAACCATGCAGCTATTAACCAGTGTCAGTCTTATCCCCACACTTTGAAACAGATACAGTTAACCATGTCAAATGAAAGTATGCTTCCATCTAGAGAACTTAAAGGTAGTATTAAGTGTATCTTCTCCCCCCCTCCACCACTTTTTCTTAAGGCTCCTGTTCCAAAGAGTGCACTTATTCCAGTAATTCCCATCACCAAATCAACAAGCTCCCGGTTCCGGAATAGTGTGGAAGGATTGAATCAGGAGATTGAAATAATAATTAAAGAGACTGGGGAAAAGGAAGAACAACTTATAAGAAGCAGCAGCACGCGCAGCATCGACACGCAGACGCCCGGCGGGGCAGAGCGGGGCAGCAACAGCAGCAGCCGCTCCCAGTCTGTGTCCCCCACGTCCTTCCTCACTATCTCCAATGAGGGGAGCGAGGAGAGCCCTTGTTCGGCTGATGACCTGCTTGTTGATCCCAGGGATAAAGAGATTGTGACCAGAGGAGCAGAGAAGTCAAATAGAGAGATTCTGAGGGGCAGACCAGGAGTGAATGATAAGCAGCCAGTGAAGAACCATTTCAGTTACTTGTCCTGGGAAGAATGGAAGTGGCATTTGAGCCCATATGCCGTGTACGGAATAGGAATACGGCAGCAACATAGATCAGTGTTCAGTGCTGAGAAGCCAAAACAACTTCACGAAATCCCGGCCTTTTACTGCCCTGACAAAAACAAGGTGAATTTCATTCCTAAAAGCGGCTCTGCTTTCTGCCTCGTCAGCATCCTTAAGCCACTCCTCCCCACACCAGATCTTACCCTCAAGGGCTCTGGCCACAGTCTGACAGTCACCACTGGCATGACAACCACTCTTCTGCAGCCTATCGCTGTGGCCTCCCTGTCTACAAACACAGAGCAAGACCGAGTCTCTCGAGGAACGAGTACAGTCCCGCCACCAGCCTCTCTCCTCCCACCACCAGAACCCATTGAGGAAGCTGAAGGATAG

Related Sequences

bmy_02972T0 SequenceType object (3)

Length: 573 aa      View alignments
>bmy_02972T0
MRATVPFQLKQQQQQHGSPTRSNGGGGGNNGGCCGGASGPSGGGGSSGAPRTASRSTSPTRGGGSAAARTSPTVATQTGASSTSTRGTSPTRGAAPGARGSPPRPQPPPPLLGTVSSPSSSPTHLWTGEVSAAPPAARVRHRRRSPEQSRSSPERRSPSAPLCKAGDKARPPSSSPSSIIRRTSSLDTLAAPYLAGHWPRDGHGQAAPCMRDKATQIAKLRQQLQRSKHSSRHHRDKERQSPFHGNHAAINQCQSYPHTLKQIQLTMSNESMLPSRELKGSIKCIFSPPPPLFLKAPVPKSALIPVIPITKSTSSRFRNSVEGLNQEIEIIIKETGEKEEQLIRSSSTRSIDTQTPGGAERGSNSSSRSQSVSPTSFLTISNEGSEESPCSADDLLVDPRDKEIVTRGAEKSNREILRGRPGVNDKQPVKNHFSYLSWEEWKWHLSPYAVYGIGIRQQHRSVFSAEKPKQLHEIPAFYCPDKNKVNFIPKSGSAFCLVSILKPLLPTPDLTLKGSGHSLTVTTGMTTTLLQPIAVASLSTNTEQDRVSRGTSTVPPPASLLPPPEPIEEAEG*