Sequence detailsbmy_02993 (Coding sequence)

Part of scaffold_84 (SequenceType object (1))

For more information consult the page for scaffold_84 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCT4ENSTTRG00000017167 (Bottlenosed dolphin)

Gene Details

chaperonin containing TCP1, subunit 4 (delta)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016271, Bottlenosed dolphin)

Protein Percentage 89.12%
cDNA percentage 89.97%
Ka/Ks Ratio 0.39363 (Ka = 0.0151, Ks = 0.0383)

CCT4ENSBTAG00000004531 (Cow)

Gene Details

T-complex protein 1 subunit delta

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042274, Cow)

Protein Percentage 98.33%
cDNA percentage 96.1%
Ka/Ks Ratio 0.0652 (Ka = 0.0087, Ks = 0.1337)

Additional orthologs identified in other species via the OPTIC pipeline.

CCT4 (Human)   Cct4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1785 bp    Location:551715..566530   Strand:+
Raw sequence 
>bmy_02993
GCCGGGCCTCCAGGCAGGCCCCTTTCCCCGCCTCCTCCTCCCGGCGCCGGTGCCGCTTTCTGGAAGCTTCGAGAAGGCGGTGGGCGCTTACTGTTAGTCCCGGGCCAGCCGGAATCCGTGTCCATCCGTCCTTCCAGAGCTCACGCAGACCCGTCCAAGCTTGCCATGCCGGAGAACGTAGCCCCCCGGAGCGGGCCGCCCGCCGGGCTTGCCGGCGGCCGCGGGAGGAGCGCCTATCAGGACCGCGATAAGCCGGCCCAGATCCGCTTCAGCAACATCTCCGCGGCCAAAGCTGTTGCTGATGCTATTAGAACAAGCCTTGGACCGAAAGGAATGGATAAAATGATTCAAGATGGAAAAGGTGATGTGACCATTACAAATGATGGTGCCACCATTCTGAAACAAATGCAGGTGTTACATCCAGCAGCCAGAATGCTGGTGGAGCTATCTAAGGCTCAGGATATAGAAGCGGGAGATGGCACGACATCAGTGGTCATTATTGCTGGCTCTCTCTTAGATTCCTGTACCAAGCTTCTTCAGAAAGGGATTCATCCCACCATCATTTCTGAGTCATTCCAGAAGGCTTTGGAAAAGGGTATTGAAGTCTTGACTGACATGTCTCGACCTGTGGAACTGAGTGACAGAGAAACTTTGTTAAATAGTGCAGCCACTTCATTGAACTCAAAGGTTGTCTCTCAATATTCAAGTCTCCTTTCTCCAATGACTGTAAATGCAGTGATGAAAGTGATTGACCCAGCCACAGCTACTAGTGTAGATCTTAGAGATGTTAAAATAGTTAAGAAACTTGGTGGGACAATTGATGACTGTGAGTTGGTGGAAGGTCTGGTTCTTACTCAAAAGGTGGCAAATTCTGGCATAACCAGGGTTGAAAAGGCTAAGATTGGGCTTATTCAGTTCTGCTTATCTGCTCCCAAAACAGATATGGACAATCAAATAGTAGTTTCTGACTACGTCCAGATGGACCGAGTGCTACGAGAGGAGAGAGCCTATATTCTAAATTTAGTGAAGCAAATTAAGAAAACAGGATGTAATGTTCTTCTCATACAGAAGTCTATTCTAAGAGATGCTCTTAGTGATCTTGCATTACATTTCCTGAACAAAATGAAGATTATGGTGGTTAAGGATATTGAAAGAGAAGACATTGAATTCATTTGTAAGACTATTGGAACCAAACCAGTTGCTCATGTTGACCAGTTCACTGCTGACATGCTGGGATCGGCTGAGTTAGCTGAGGAGGTCAGCTTAAATGGTTCTGGCAAACTGATCAAGATTACAGGCTGTGCAAGCCCTGGGAAAACAGTTACAATCGTTGTTCGTGGTTCTAACAAATTGGTGATTGAAGAAGCTGAGCGTTCCATTCATGATGCCCTATGTGTTATTCGCTGTTTAGTGAAGAAGAGGGCTCTTATTGCAGGAGGTGGTGCTCCAGAAATAGAGTTGGCCCTGCGATTAACTGAATACTCAAGAACATTGAGTGGTATGGAATCCTACTGCGTTCGTGCTTTTGCAGATGCTATGGAGGTCATTCCATCTACACTAGCTGAAAATGCTGGCCTGAATCCCATTTCTACAGTAACAGAACTAAGAAACAGGCATGCCCAAGGAGAAAAAACTACAGGCATTAATGTCCGAAAGGGTGGTATTTCCAACATACTGGAGGAACTGGTTGTCCAGCCTCTGTTGGTTTCAGTCAGTGCACTGACTCTAGCAACTGAAACTGTCCGGAGCATTCTGAAAATTGATGATGTGGTAAACAGTCGGTAA

Related Sequences

bmy_02993T0 SequenceType object (3)

Length: 595 aa      View alignments
>bmy_02993T0
AGPPGRPLSPPPPPGAGAAFWKLREGGGRLLLVPGQPESVSIRPSRAHADPSKLAMPENVAPRSGPPAGLAGGRGRSAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEVLTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMTVNAVMKVIDPATATSVDLRDVKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNSR*