Sequence detailsbmy_03008 (Coding sequence)

Part of scaffold_84 (SequenceType object (1))

For more information consult the page for scaffold_84 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAPOLGENSTTRG00000006237 (Bottlenosed dolphin)

Gene Details

poly(A) polymerase gamma

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005900, Bottlenosed dolphin)

Protein Percentage 93.45%
cDNA percentage 93.79%
Ka/Ks Ratio 0.18339 (Ka = 0.0047, Ks = 0.0257)

PAPOLGENSBTAG00000007414 (Cow)

Gene Details

poly(A) polymerase gamma

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009749, Cow)

Protein Percentage 98.1%
cDNA percentage 96.55%
Ka/Ks Ratio 0.06614 (Ka = 0.0085, Ks = 0.129)

Additional orthologs identified in other species via the OPTIC pipeline.

PAPOLG (Human)   Papolg (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2064 bp    Location:1570676..1536938   Strand:-
Raw sequence 
>bmy_03008
ATGAAAGAGATGTCTGCGCTGGTTGTTCTTGGTAAACTGAACAATTTAGTAAAAGAATGGATTTCTGAGGTCAGTGAGAGTAAGAATCTCCCACCTTCTGTTGTGGCTACTGTTGGTGGAAAAATTTTCACCTTTGGCTCCTATAGGCTTGGAGTACACACCAAAGGAGCTGACATTGATGCACTTTGTGTTGCTCCAAGACATGTGGAGAGATCTGATTTTTTTCAGTCTTTTTTTGAAAAATTGAAACATCAAGATGGCATTAGAAACTTAAGAGCTGTAGAAGATGCCTTTGTTCCTGTTATAAAATTTGAATTTGATGGAATTGAAATTGATCTAGTCTTTGCAAGACTGGCAATACAAACCATATCAGATAATTTAGATCTAAGAGACGACTCTCGACTGAGAAGCCTTGATATAAGGTGTATTCGCAGCCTAAATGGGTGTAGAGTTACTGATGAAATTTTGCATTTAGTGCCAAATAAAGAAACTTTCAGACTCACCCTAAGAGCAGTCAAACTATGGGCAAAACGACGTGGTATTTATTCCAACATGTTGGGATTCCTTGGTGGTGTCTCCTGGGCAATGCTAGTTGCAAGAACTTGCCAATTATATCCAAATGCAGCAGCTTCTACTTTAGTTCATAAGTTCTTCTTAGTTTTTTCCAAGTGGGAATGGCCAAATCCTGTGCTGCTAAAGCAACCAGAAGAAAGCAATTTGAATTTGCCAGTTTGGGATCCTCGGGTAAATCCATCAGATAGGTATCATCTCATGCCCATAATCACCCCTGCCTACCCACAACAGAATTCTACGTATAATGTGTCCACATCAACTCGAACAGTAATGGTAGAAGAATTTAAACAAGGTCTTGCAGTCACAGATGAAATTCTTCAAGGGAAATCAGATTGGTCCAAACTCCTTGAGCCACCAAATTTTTTCCAAAAGTATCGACATTATATAGTATTGACTGCCAGTGCATCAACAGAAGAAAATCATCTAGAGTGGGTTGGATTAGTAGAATCTAAAATACGTGTACTTGTTGGAAATTTGGAACGGAATGAATTTATTACTCTTGCCCATGTAAATCCCCAATCATTCCCAGGAAATAAGGAACATCATAAAGACAACAATTACGTATCAATGTGGTTCCTTGGAATAATTTTTCGGAGAGTAGAAAATGCAGAAAGTGTTAATATAGACTTGACATATGATATACAGTCATTTACTGATACAGTGTACAGACAGGCAAACAATATAAACATGCTAAAGGAGGGAATGAAAATTGAAGCAACTCATGTTAAAAAAAAACAACTTCATCACTACCTTCCCGCAGAGATTCTTCAGAAGAAGAAAAAGCAAAGTCTTTCTGATGTCAGTCGAAGTTCAAGTGGACCTCAATCCAAAAGATCATCTCTGGATAGCAATTGTTTGGATAGCTCCAGAGACACTGATAATGGAACACCTTTTAATTCCCCAGTGTCTACAAACAAGCCTTCCAAGCCTGATATTCCTCCTTCAGGAGAGACAGAAAGGAATAATGCTGAGCCTGCTGCTGTAGTTGTGGAAAAGCCACTGACTGTCCCTCCAGCTCAAGGGCTGTCTATTCCCGTCATTGGTGCAAAAGTTGACTCTGCAGTAAAAGCTGTATCACCTCCAGCTGTGTGTACCATTCCTACTGTAGTAGGACGAAATGTCATTCCTAGAATCACAACACCCCACAACCCTGCCCAGGGGCAGCCACATCTAAATGGAATGTCAAATATAACTAAGAATGTTGCCACCAAAAGATCCCACTCCCCATCCGTAGATGGGTCTTCTAAGAGGTTGAAAGACATAGAAAAGTTTATTCGACTTGAATCAACGTTTAAGGAATCACGTGCTGCTGAAGACAGAAAAAGAAAATCAGTGGATGCCATTGGAGGAGAATGTATGCCTATTCCAACTATTGATACATCACGCAAAAAGAGACTGCCCAGTAAAGAACTACCAGATTCATCATCTCCAGTTCCAGCAAATAACATCCGTGTCATCAAAAATTCCATTCGACTGACCCTAAATCGGTAA

Related Sequences

bmy_03008T0 SequenceType object (3)

Length: 688 aa      View alignments
>bmy_03008T0
MKEMSALVVLGKLNNLVKEWISEVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSSSGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSTNKPSKPDIPPSGETERNNAEPAAVVVEKPLTVPPAQGLSIPVIGAKVDSAVKAVSPPAVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKNVATKRSHSPSVDGSSKRLKDIEKFIRLESTFKESRAAEDRKRKSVDAIGGECMPIPTIDTSRKKRLPSKELPDSSSPVPANNIRVIKNSIRLTLNR*