Sequence detailsbmy_03057 (Coding sequence)

Part of scaffold_87 (SequenceType object (1))

For more information consult the page for scaffold_87 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABLIM1ENSBTAG00000004899 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006447, Cow)

Protein Percentage 78.02%
cDNA percentage 81.48%
Ka/Ks Ratio 0.44315 (Ka = 0.1724, Ks = 0.3889)

ABLIM1 (Minke Whale)

Gene Details

actin binding LIM protein 1

External Links

Gene match (Identifier: BACU004673, Minke Whale)

Protein Percentage 13.45%
cDNA percentage 30.91%
Ka/Ks Ratio 0.24318 (Ka = 1.7142, Ks = 7.0493)

Additional orthologs identified in other species via the OPTIC pipeline.

ABLIM1 (Human)   Ablim1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1248 bp    Location:1681573..1648932   Strand:-
Raw sequence 
>bmy_03057
CCTACCAGGACTTCTTCCGAAAGCATTTATTCTAGACCAGGCTCCAGTATCCCTGGGTCTCCAGGTCATACTATCTATGCAAAAGTGGACAATGAAATCCTGGATTACAAGGATTTAGCAGCCATTCCCAAGGTCAAGGCAATTTATGACATTGAACGTCCAGATCTTATTACCTATGAGCCTTTCTACTCTTCGGGCTATGATGACAAACAGGAGAGGCAGAGCCTGGGAGAGGGGTACCAGGATGGGCGGGACCGGATGATCCACCGGTCCACCAGCCAGGGCTCCATCAACTCCCCTGTGTACAGCCGTCACAGCTACACTCCAACCACGTCTCGCTCTCCCCAGCATTTTCACAGACCTGAGCTGCTGTCTCCTGGTGTGCAGAGGTCCTTCCTGCACACCGGCAGCCTCAGCTCCGGCCACAGCGACTCCCGCCCCAACTCCCCTTTCCGACACCACTTCCTTCCCCATATCAAAGGCAATGAGCCATCCAGCGGCCGGAACTCCCCTCTCCCTTATCGGCCAGACAGCCGCCCTGTCACTCCAACTTACGCTCAGGCCCCTAAACATTTCCATGTTCCAGATCAAGGGATCAACATTTACCGAAAACCACCCATCTACAAACAGCATGATGCAGCTGCCTTGGCAGCCCAGAGCAAGTCTTCAGAAGACATCATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCTCCAGACCCCAGCGAGATACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCCCTCACTTGCCGCCATAGCTCAACTCGGGCCTGGGCCAGTTGATACTGAAAGAAGAGATGGAGAAGGAGAGGGAGAGCCGGGAGAGCTTCACATGCTCTATCATCGAAAACCTCATCTCTCCCAGGCTATGGGAAAAACGGGCTTCACCGGCCTGTTTCTACAGACTTTGCTCAGTACAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAGACCCTCCCAGATGGCCACATGCCTGGAATGAGGATGGACCGGGGCGTCTCCATGCCTAACATAGGGCGCAGCAAAATCCTAAGAGACGTGGACAGAACCAGGCTAGAGGTCATCCATGTGGCCGTCAGGACTGACCACTGTTCTCTTCTCCCATCACAGCGCCACTTAGCCCCAGAAGTGTTTCGGGAAATCTTTGGAATGTCCATCCAGGAGTTTGACAAGTTACCTCTTTGGAGACGCAACGACATGAAGAAAAAAGCAAAACTCTTCTGA

Related Sequences

bmy_03057T0 SequenceType object (3)

Length: 416 aa      View alignments
>bmy_03057T0
PTRTSSESIYSRPGSSIPGSPGHTIYAKVDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFYSSGYDDKQERQSLGEGYQDGRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQHFHRPELLSPGVQRSFLHTGSLSSGHSDSRPNSPFRHHFLPHIKGNEPSSGRNSPLPYRPDSRPVTPTYAQAPKHFHVPDQGINIYRKPPIYKQHDAAALAAQSKSSEDIIKFSKFPAAQAPDPSEIPKIETDHWPGPPSLAAIAQLGPGPVDTERRDGEGEGEPGELHMLYHRKPHLSQAMGKTGFTGLFLQTLLSTTAMGMSAGECETLPDGHMPGMRMDRGVSMPNIGRSKILRDVDRTRLEVIHVAVRTDHCSLLPSQRHLAPEVFREIFGMSIQEFDKLPLWRRNDMKKKAKLF*