Sequence details bmy_03061 (Coding sequence)

Part of scaffold_86 (Scaffold)

For more information consult the page for scaffold_86 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EXOSC8 ENSTTRG00000007906 (Bottlenosed dolphin)

Gene Details

exosome component 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007481, Bottlenosed dolphin)

Protein Percentage 75.17%
cDNA percentage 77.01%
Ka/Ks Ratio 0.47573 (Ka = 0.1327, Ks = 0.2788)

EXOSC8 ENSBTAG00000011855 (Cow)

Gene Details

Exosome complex component RRP43

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015733, Cow)

Protein Percentage 82.76%
cDNA percentage 84.83%
Ka/Ks Ratio 0.3157 (Ka = 0.1255, Ks = 0.3976)

EXOSC8  (Minke Whale)

Gene Details

exosome component 8

External Links

Gene match (Identifier: BACU010025, Minke Whale)

Protein Percentage 51.02%
cDNA percentage 62.93%
Ka/Ks Ratio 0.49906 (Ka = 0.4814, Ks = 0.9646)

Additional orthologs identified in other species via the OPTIC pipeline.

EXOSC8 (Human)   Exosc8 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 438 bp    Location:103917..91630   Strand:-
Raw sequence 
>bmy_03061
ATGGTTATTGCAAAGAACTGTGGAACCCCTGGAGTATTACAGGAGATTTTTGGTTCAATTGGTACTGCAGATGGTTCTTCTTTAGTGAAGCTGGGAAATACTACAGTAATTTGTGGAATTAAAGCGGAATTTGGAGCACCACCAACAGATGCCCCTGATAAAGGATATGTTGTACAGTTGCCTGAAGTAACTATAAATGAAGAAACTGCTTTAGCAGAAGTTAATTTAAAGAAGAAAAGTTATTTGAATATTAGAACTCATCCAGTTGCAACTTCCTTTGCTGTGTTTGATGACACTCTGCTTATAGTTGACCCTACTGAAGAGGAGGAAAACCTGGCAACTGGAACCTTAACAGTAGTAATGGACGAGGAAGGCAAGCTATGTTGTCTTCACAAACCAGGCACGCACTTTCCTTCCATTGCAGTACTAAACACGTAG

Related Sequences

bmy_03061T0 Protein

Length: 146 aa      View alignments
>bmy_03061T0
MVIAKNCGTPGVLQEIFGSIGTADGSSLVKLGNTTVICGIKAEFGAPPTDAPDKGYVVQLPEVTINEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEENLATGTLTVVMDEEGKLCCLHKPGTHFPSIAVLNT*