Sequence detailsbmy_03083 (Coding sequence)

Part of scaffold_90 (SequenceType object (1))

For more information consult the page for scaffold_90 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IL17FENSTTRG00000003712 (Bottlenosed dolphin)

Gene Details

interleukin 17F

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003482, Bottlenosed dolphin)

Protein Percentage 68.99%
cDNA percentage 72.15%
Ka/Ks Ratio 0.5992 (Ka = 0.0973, Ks = 0.1623)

IL17FENSBTAG00000016835 (Cow)

Gene Details

interleukin-17F precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022393, Cow)

Protein Percentage 67.66%
cDNA percentage 80.24%
Ka/Ks Ratio 0.46547 (Ka = 0.2023, Ks = 0.4346)

Additional orthologs identified in other species via the OPTIC pipeline.

IL17F (Human)   Il17f (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 549 bp    Location:349336..340169   Strand:-
Raw sequence 
>bmy_03083
GAGAGCTGCTGTGGTCTTCTCTGCATTGAGCAAGTGACACCAGAGTCACTAACCAGTCCCATTCTCATCTATTTCCAGGTCAAGTCCCTGCTGCTGTTGACATTGGGGCTGACCCTCCTGGGGGAGGTGGCAGCTCGGAAAACCCCCAAAGCTGGGGACCCTGCCCTCTGTCCCGCTCTGGAGGACCATACTGTGAGGGTTGATATCCGCATCCTCAGGCAGACCCAGGGCGCTCTCCTCTCACACGACTTCCAGAACCGCTCCAGCTCCCCCTGGGATTACAACATCACCCGGGACCCCCACCGGTTCCCCTCCGAGATCGCAGAGGCCCGGTGCAGGCACACGGGCTGCATCGACGCCGAGGGGAAGGAAGACAGCTCCGTGAACTCCGTCCCCATCCAGCAAGAGTTCCTGGTCCTCCGGAGGGAGTCCCAGGGTTGCTCTCGCTCCTTCCGGCTGGAGAAGGTGCGGGTGACTGTTGGTTGCACCTGTGTCACCCCCATCGTCCGCTACGTGCGTGGCTTGAGGGCGGCAGATCAGCTCAGCTGA

Related Sequences

bmy_03083T0 SequenceType object (3)

Length: 183 aa      View alignments
>bmy_03083T0
ESCCGLLCIEQVTPESLTSPILIYFQVKSLLLLTLGLTLLGEVAARKTPKAGDPALCPALEDHTVRVDIRILRQTQGALLSHDFQNRSSSPWDYNITRDPHRFPSEIAEARCRHTGCIDAEGKEDSSVNSVPIQQEFLVLRRESQGCSRSFRLEKVRVTVGCTCVTPIVRYVRGLRAADQLS*