Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAM2 ENSTTRG00000015226 (Bottlenosed dolphin)

Gene Details

translocation associated membrane protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014434, Bottlenosed dolphin)

Protein Percentage 85.6%
cDNA percentage 88.32%
Ka/Ks Ratio 0.50683 (Ka = 0.1093, Ks = 0.2157)

TRAM2 ENSBTAG00000009112 (Cow)

Gene Details

translocating chain-associated membrane protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012010, Cow)

Protein Percentage 83.51%
cDNA percentage 82.61%
Ka/Ks Ratio 0.18505 (Ka = 0.1227, Ks = 0.6632)

TRAM2  (Minke Whale)

Gene Details

translocation associated membrane protein 2

External Links

Gene match (Identifier: BACU015859, Minke Whale)

Protein Percentage 79.46%
cDNA percentage 83.69%
Ka/Ks Ratio 0.53906 (Ka = 0.1633, Ks = 0.3029)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1149 bp    Location:587285..568748   Strand:-
>bmy_03088
ATGCCGTGTGCTGGCTTCTCCTTTCCCCTCCGCACTGGTGCTCCCAAGGGCCAAGTCCAGAGGGTGGGTGGGATTCTCGGGAAGAAACTCTTCTCAGTCTGSGGTTACAGCCAAAGGGAAGCATTTGATGGCACATTCTGCTCCAGATCTCCTTTCAGTTTTGGGTCCCAGAGCACTTCCTCACCCAGGGATGCTGACGTGGCTCTCGTTGCCTCCACAGATGGCGAGACGGTGCACTACCACTACGGGCCGAAGGACCTGGTCACAGTCTTGTTCTACATCTTCATCACCATCATCCTGCACGCTGTGGTGCAGGAGTACATTTTAGATAAAATCAGCAAACGGCTTCATCTCTCCAAGGTCAAGCACAGCAAGTTCAACGAATCTGGACAGCTGGTCGTCTTTCACCTCAGCTCGGTGATCTGGTGCTTCTACGTGGTGGTGACGGAAGGATATTTAACAAACCCAAGGAGCCTCTGGGAAGACTATCCGCATGTATACCTCCCCTTCCAGGTGAAGTTCTTCTACCTGTGCCAGCTGGCCTACTGGCTGCACGCGCTTCCTGAGCTCTACTTCCAGAAGGTACGGAAGGAGGAGATTCCCCGGCAGCTCCAGTACATCTGCCTGTACCTGGTCCATATTGCGGGCGCGTACCTCTTAAACCTGAGCCGCCTGGGCCTGGTCCTGCTCCTGCTGCAGTACTCGACCGAGTTCCTCTTCCACACGGCTCGGCTCTGCTACTTTGCAGACGAGAACAACGAGAAGCTGTTTAACGCCTGGGCTGCTGCATTTGGAGCCACCCGCCTCTTCATCCTCACCCTTGCTGTGCTGGCCATTGGCTTTGGCCTTGCTCGCGTGGAAAACCAGGCCTTTGACCCCGAGAAAGGGAACTTCAACACGTTACTTTGCAGGCTGTGCGTGCTGCTCCTGGTGTGCGCCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGCTGCGGCACTGGCGCGAGCACTGGAGCGAGCAGAGCGCCAAGCGCAGAGTGCCCGCCGCGCCCAGGCTGGCAGCCAGGCTCGTCAAGAGGGAGTCGGGTTACCACGAAAACGGAGTGGTGAAAGCAGAGAACGGAACCTCCACACGGACTAAGAAACTCAAGTCTCCTTAG

Related Sequences

bmy_03088T0 Protein

Length: 383 aa      View alignments
>bmy_03088T0
MPCAGFSFPLRTGAPKGQVQRVGGILGKKLFSVXGYSQREAFDGTFCSRSPFSFGSQSTSSPRDADVALVASTDGETVHYHYGPKDLVTVLFYIFITIILHAVVQEYILDKISKRLHLSKVKHSKFNESGQLVVFHLSSVIWCFYVVVTEGYLTNPRSLWEDYPHVYLPFQVKFFYLCQLAYWLHALPELYFQKVRKEEIPRQLQYICLYLVHIAGAYLLNLSRLGLVLLLLQYSTEFLFHTARLCYFADENNEKLFNAWAAAFGATRLFILTLAVLAIGFGLARVENQAFDPEKGNFNTLLCRLCVLLLVCAAQAWLMWRFIHSQLRHWREHWSEQSAKRRVPAAPRLAARLVKRESGYHENGVVKAENGTSTRTKKLKSP*