Sequence detailsbmy_03100 (Coding sequence)

Part of scaffold_90 (SequenceType object (1))

For more information consult the page for scaffold_90 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.105763ENSBTAG00000009656 (Cow)

Gene Details

major histocompatibility complex, class II, DQ alpha 2 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000034179, Cow)

Protein Percentage 85.04%
cDNA percentage 88.19%
Ka/Ks Ratio 0.33081 (Ka = 0.0878, Ks = 0.2655)

Genome Location

Sequence SequenceType object (2)

Length: 768 bp    Location:1235634..1227560   Strand:-
Raw sequence 
>bmy_03100
ATGGTCCTGAACAGAGCTCTGATTCTGGGGGCCCTCACCCTGACCACCATGATGAGCCCCTGTGGAGGTGAAGACATTGAGGCTGACCACGTTGGCACCTATGGCACAACTATCTACCAGTCTTATGGTCCCTCTGGCCAGTACACCCAAGAATTTGATGGCGATGAGCTATTTTATGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTGTGTTTAGCCAATTCGCAGGTTTTGACCCACAGGGTGCCCTGAGAAACATAGCTGTGGGGAAACATAACTTGGATATCCTGATTAAACGCTCCAACTTTACCCCTGTTACCAATGAGGTTCCTGAGGTGACTGTGTTTTCTAAGTTCCCTGTGTCGCTGCATCAACCCAACACCCTCATCTGTCTTGTGGACAACATCTATCCTCCTGTGATCAACATCACATGGTTGAGGAACGGACACTCAGTCAGAGAGGGTGTTTCTGAGATCAGCTTCCTCCCGAAGAATGATCTTTCCTTCCTCAAGATCAGTTATCTCACCTTCCTCCCTTCTGATGAAGATGTTTATGACTGCGAAGTGGAGCACTGGGGCCTGGATGAGCCACTGCTGAAACACTGGGAGCCTGAGATTCCAACCCCTATGTCAGAGCTGACAGAGACTGTGGTCTGCGCCCTGGGGTTGACTGTGGGCCTCGTAGGCATCGTGGTGGGCACTGTCTTCATCATCCAAGGCCTGCGCTCAGGTGGTCCCTCCAGACACCAAGGGCCCTTGTGA

Related Sequences

bmy_03100T0 SequenceType object (3)

Length: 256 aa      
>bmy_03100T0
MVLNRALILGALTLTTMMSPCGGEDIEADHVGTYGTTIYQSYGPSGQYTQEFDGDELFYVDLEKKETVWRLPVFSQFAGFDPQGALRNIAVGKHNLDILIKRSNFTPVTNEVPEVTVFSKFPVSLHQPNTLICLVDNIYPPVINITWLRNGHSVREGVSEISFLPKNDLSFLKISYLTFLPSDEDVYDCEVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFIIQGLRSGGPSRHQGPL*