Sequence detailsbmy_03120 (Coding sequence)

Part of scaffold_90 (SequenceType object (1))

For more information consult the page for scaffold_90 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATF6BENSTTRG00000005958 (Bottlenosed dolphin)

Gene Details

activating transcription factor 6 beta

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005636, Bottlenosed dolphin)

Protein Percentage 96.91%
cDNA percentage 97.17%
Ka/Ks Ratio 0.34531 (Ka = 0.0189, Ks = 0.0548)

ATF6BENSBTAG00000008794 (Cow)

Gene Details

cyclic AMP-dependent transcription factor ATF-6 beta

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042742, Cow)

Protein Percentage 91.52%
cDNA percentage 92.59%
Ka/Ks Ratio 0.26061 (Ka = 0.0457, Ks = 0.1755)

Additional orthologs identified in other species via the OPTIC pipeline.

Atf6b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2178 bp    Location:1667179..1677040   Strand:+
Raw sequence 
>bmy_03120
ATGGCGGAGCTGATGCTCCTCAGCGAGATTGCGGACCCGACGCGCTTTTTCACCGACAATTTGCTGAGCCCGGAGGACTGGGGTGCGCGGATGGGCGGGCGGTGGGTCTGGCCGAGCCGAGCCAATGAGGGATGGGTCGAGGGCTTTGTGTGGATCCGAAGGCTGCGCTACCGGAAGACCYCCCGACCCTCCGCACCTCTTGCAGACAGCACATTATACGCTGGCCTGGATGAAGCGGCCGAGGAGCAGACGCAGCTCTTCCTTTGCCCGGAGCAGGATGTCCCGTTTGGCAGCAGTTCCCTGGACTTGGGGATGGATGTCAGCCCTCCTGAACCCCCCTGGGACTCTCTGCCTATCTTCCCAGATCTTCAGGTGAAGTCTGAGCCATCCTCCCCCTGCTCTTCCTCCTCTCTCAGCTCTGAATCGTCGCGCCTTTCTACAGAGCCCTCCAGCCAGGCCTCTGGTGTAGGGGAGGTGCTGGTCGTGAAGTCAGAGTCCTTGACACCCTCACTCTGCCTCCTGGGAGATGATCCAACATCCCCATTTGAAACTGTCCAGATCAATGTGGGCCCCACCTCTGATGATCCCTCAGATGTCCAGATTAAGATAGAACCTGTCTCTCCATCTTCCTCCATCAACTCGGAGGCTTCCCTGCTCTCTGCGGAGTCCCCCAGCCAGGCTTTTATAGGAGAGGAGGTACTGGAAGTGAAGACAGAGTCCCCATCCCCTCAAGGGTGTCTCTTGCGGGATGTCTCAGGCCCCCCACTTGGAGCTGTCCAGATCAGCATGGGCCTGTCCTCTGATGGCTCCTCAGGCAAACCCCTGCCCGCCCGGAAGCCACCACTGCAGCCCAAACCTGTGGTGATAACCACTGTCCCGATGCCACCGAGAGCCGTGCCTCCCAGCACCACTGTCCTTTTGCAGCCCCTTGTCCAGCCACCCCCAGTGTCCCCAGTTGTTCTCATCCAAGGTGCTATTCGAGTCCAGCCTGAGGGACTGACCCCCCCTGCTCCACGGCCTGAGAGGAAGAGCATTGTTCCAGCTCCTATGCCTGGGAACTCCTGCCCACCTGAGGTGGATGCAAAGCTGCTGAAGCGGCAGCAGCGAATGAYCAAGAACCGGGAGTCGGCCTGCCAGTCCCGGAGGAAGAAGAAAGAGTATCTGCAGGGGCTGGAAGCTCGGCTGCAGGCGGTGCTGGCCGACAACCAGCAGCTCCGGCGGGAGAATGCTGCCCTCCGCCGGCGGCTGGAGGCCCTGCTGGCTGAGAACAGCGAGCTCAAGTTAGGGTCTGGAAACAGGAAGGTGGTCTGCATCATGGTCTTCCTTCTCTTCATTGCCTTCAACTTTGGGCCTGTCAGCATCAGTGAGCCTCCTCCAGCTCCCATCTCTCCTCGGATGAGCAGAGAGGAGCCTCGACCCCAGAGACACTTGCTGGAGTTCTCGGCGCAAGAGCCAGTTCACGGAGTCGAGCACCCCCAGCATCCCTCCCAGGGTCCCAAGGAGACCCAGCCCAGCTCCACAGGCCCCCCAAGTTTCAGGAACCTGACAGCCTTCCCTGGGGGCACCAAGGAGCTGCTGCTGAGAGACCTGGACCAGCTCTTCCTCTCCTCTGATTGCCGGCACTTCAACCGAACCGAGTCCCTGAGATACTTCTCCTTCCAGAAGTCTCAGCTATGGAAGAAGTCGCCTCCAGTTAAGGCAGTCCCCACCCAACCCCCTGGGCCCCCAGAAAGGGATTCTGTGGGCCAGCTGCAGCTATATCGCCAACCAGATCGTTCGCAGCCGGAGTTCCTGGATGCAATTGACCGACGGGAAGACACATTTTATGTTGTCTCCTTCCGAAGGGACCACTTGCTGCTCCCAGCCATCAGCCACAACAAGACCTCTCGGCCCAAGATGTCCCTGGTGATGCCCGCCATGGCCCCCAATGAGACCCTGTCAGGCCGGGGGCCCCCGGGGGACTATGAGGAGATGATGCAGATCGAGTGTGAGGTCATGGACACCAGGGTGATTCACATCAAGACCTCCACAGTGCCCCCCTCGCTCCGAAAACAGCCGTCCTCAACCCCGGGCAATGCCACAGGTGGCCCCTTGCCAGCTTCTGCAGCCAGCCAGGCCCACCAGGCCGCCCGTCAGCCCTCTACCTCAATCATCCCTGACCTCTACGACTCACACTGA

Related Sequences

bmy_03120T0 SequenceType object (3)

Length: 726 aa      View alignments
>bmy_03120T0
MAELMLLSEIADPTRFFTDNLLSPEDWGARMGGRWVWPSRANEGWVEGFVWIRRLRYRKTXRPSAPLADSTLYAGLDEAAEEQTQLFLCPEQDVPFGSSSLDLGMDVSPPEPPWDSLPIFPDLQVKSEPSSPCSSSSLSSESSRLSTEPSSQASGVGEVLVVKSESLTPSLCLLGDDPTSPFETVQINVGPTSDDPSDVQIKIEPVSPSSSINSEASLLSAESPSQAFIGEEVLEVKTESPSPQGCLLRDVSGPPLGAVQISMGLSSDGSSGKPLPARKPPLQPKPVVITTVPMPPRAVPPSTTVLLQPLVQPPPVSPVVLIQGAIRVQPEGLTPPAPRPERKSIVPAPMPGNSCPPEVDAKLLKRQQRMXKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALRRRLEALLAENSELKLGSGNRKVVCIMVFLLFIAFNFGPVSISEPPPAPISPRMSREEPRPQRHLLEFSAQEPVHGVEHPQHPSQGPKETQPSSTGPPSFRNLTAFPGGTKELLLRDLDQLFLSSDCRHFNRTESLRYFSFQKSQLWKKSPPVKAVPTQPPGPPERDSVGQLQLYRQPDRSQPEFLDAIDRREDTFYVVSFRRDHLLLPAISHNKTSRPKMSLVMPAMAPNETLSGRGPPGDYEEMMQIECEVMDTRVIHIKTSTVPPSLRKQPSSTPGNATGGPLPASAASQAHQAARQPSTSIIPDLYDSH*