Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC44A4 ENSTTRG00000014144 (Bottlenosed dolphin)

Gene Details

solute carrier family 44, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013415, Bottlenosed dolphin)

Protein Percentage 74.28%
cDNA percentage 77.55%
Ka/Ks Ratio 0.52807 (Ka = 0.1097, Ks = 0.2078)

SLC44A4 ENSBTAG00000005675 (Cow)

Gene Details

Choline transporter-like protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042762, Cow)

Protein Percentage 80.54%
cDNA percentage 83.64%
Ka/Ks Ratio 0.33224 (Ka = 0.137, Ks = 0.4123)

SLC44A4  (Minke Whale)

Gene Details

solute carrier family 44, member 4

External Links

Gene match (Identifier: BACU015884, Minke Whale)

Protein Percentage 87.63%
cDNA percentage 90.28%
Ka/Ks Ratio 0.49585 (Ka = 0.0884, Ks = 0.1782)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1776 bp    Location:1851316..1862780   Strand:+
>bmy_03129
ATGCCTCACTCTCCACACTCCTCCCCATGCCCTTCAGGGAAACCAGCCAAACATGACCCCTCCTTTCGAGGCCCCATCAAGAACAGGAGCTGCACAGATATCATCTGCTGTGTCCTCTTCTTCCTCTTCATTCTGGGTTACATCGCCGTGGGGCTTGTGGCCTGGGTGTATGGAGACCCCCAGCAAGTCCTCTACCCCAGGAACTCTACTGGGGCCTATTGCGGGATCGGGGAAAACAAAGATAAACCATATCTCCTATACTTCAACATCTTCAGCTGCGTCCTAACCACCAACATCAACGGGATCACCCAGAATGGCCTGGAGTGCCCCACACCCCAGAGGTCCCATGGACTGTGGGAACGGCCCAGCTCTCACAGACGGTCAGGCAGGTCTTCTACGCAGCAAATAGGAACTTTTGTCTGCCAGGGGTGCCTGGGGACATGTACTGTGCCTGAGCTCCCAGGGATCTCCAACACGTCCATCGCCCAGGGCATCAGCGGTCTTCTTGACAGCCTCAACGCCCGTGACATCAGTGTCAGGATCTTTGAAGACTTTGCCCAATCCTGGTATTGGATTCTTATTGCCCTAGGCGTGGCTCTGGTCCTGAGCCTGCTGTTTATCCTGCTTCTGCGCCTGGTGGCCGGGCCCCTGGTGTTTGTGCTGATCATAGGGGTGCTGGGCGTGCTGGCATACGGCATCTACCACTCCTGGGAGGAATACCGCGTACTGCGGGACAAGGGTGCCTCCATCTCCCAGCTGGGCTTCACCACCAACCTCAGCGCCTACAGCAGCATTCAGGAGACCTGGCTAGCAGCCTTGATCGTGCTGGCTGTGCTTGAAGGCATCCTGCTACTGATGCTCATCTTCCTGCGGCAGCGGATTCGCATCGCCATCGCCCTCCTGGAGGAAGCCAGCAGGACAGATGATGTCTACCATGTTCTACCCGTTGTTCACCTTTGTTCTGCTGCTTGTCTGCATTGCCTACTGGGCCATGACCGCTCTGACCAGCCAGTGAACTCCTCCTGCCCAGGGCTGATGTGCGTCTTCCAGGGCTACTTGTCCACAGGCCTAGTACAACGTTCTCTCTTCAACTTGCAAATCTACGGGGTCCTGGGGCTGTTCTGGACCATCAACTGGGTACTAGCCCTGGGCCAGTGTGTCCTGGCTGGGGCCTTTGCCTCCTTCTACTGGGCCTTCCACAAGCCCCGGGACATCCCTACCTTTCCCCTGAGCTCTGCCTTCATCCGCACACTCCGTTACCACACTGGGTCACTAGCCTTTGGAGCCCTCATCTTGACCCTGGTGCAGATAGCCAGGGTCATCCTGGAGTACATTGACCACAAACTGAGAGGAACCCAGAACCCTATGGCCCGCTGTATCATGTGCTGCTTCAAGTGCTGCCTCTGGTGTTTGGAAAAGTTTATCAAGTTCCTGAACCGCAATGCATACATCATGCTGCTGGTGGTTGGAGGTGTCGGGGTCCTGTCCTTCTTTTTTTTCACCGGTCGCATCCAGGGACTGGGTAAAGACATTCAGAGTCCCCAACTCAACTATTACTGGCTGCCCATCATGACCTCCATCCTGGGGGCCTATGTCATCGCCAGCGGCTTCTTCAGCGTTTTCGGCATGTGTGTGGACACTCTCTTCCTCTGTTTCTTGGAAGACTTGGAGAGGAACGACGGTTCCGTGGACCGGCCCTACTACATGTCCAAGGCCCTTCTGAAGATTCTGGGCAAGAAGAACGAGATGCCCCCGGGAGACAAGAGGAAGAAGTGA

Related Sequences

bmy_03129T0 Protein

Length: 592 aa      View alignments
>bmy_03129T0
MPHSPHSSPCPSGKPAKHDPSFRGPIKNRSCTDIICCVLFFLFILGYIAVGLVAWVYGDPQQVLYPRNSTGAYCGIGENKDKPYLLYFNIFSCVLTTNINGITQNGLECPTPQRSHGLWERPSSHRRSGRSSTQQIGTFVCQGCLGTCTVPELPGISNTSIAQGISGLLDSLNARDISVRIFEDFAQSWYWILIALGVALVLSLLFILLLRLVAGPLVFVLIIGVLGVLAYGIYHSWEEYRVLRDKGASISQLGFTTNLSAYSSIQETWLAALIVLAVLEGILLLMLIFLRQRIRIAIALLEEASRTDDVYHVLPVVHLCSAACLHCLLGHDRSDQPVNSSCPGLMCVFQGYLSTGLVQRSLFNLQIYGVLGLFWTINWVLALGQCVLAGAFASFYWAFHKPRDIPTFPLSSAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLRGTQNPMARCIMCCFKCCLWCLEKFIKFLNRNAYIMLLVVGGVGVLSFFFFTGRIQGLGKDIQSPQLNYYWLPIMTSILGAYVIASGFFSVFGMCVDTLFLCFLEDLERNDGSVDRPYYMSKALLKILGKKNEMPPGDKRKK*