Sequence detailsbmy_03135 (Coding sequence)

Part of scaffold_90 (SequenceType object (1))

For more information consult the page for scaffold_90 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LSM2ENSTTRG00000014131 (Bottlenosed dolphin)

Gene Details

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013402, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.3%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0201)

LSM2ENSBTAG00000005634 (Cow)

Gene Details

U6 snRNA-associated Sm-like protein LSm2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007405, Cow)

Protein Percentage 100.0%
cDNA percentage 97.19%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1325)

Additional orthologs identified in other species via the OPTIC pipeline.

Lsm2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 477 bp    Location:1908207..1912958   Strand:+
Raw sequence 
>bmy_03135
CCCCGAGCCGCGATCCTGCGGGGCGCTGTCTTCCACCCCTCGGAGCAATCCGCGGCGCTTCCCGCTGCGCCTGCGCGACTCCCTCCCGCCCCACGTGCGGGTTGGCGTTCCAGTTGCCGCCAGGCCCTCGATCTACTGCCCCCGGCCCTCGCCCTCCCGGTCCGGCGGGCGCCCGGCGGCGCAAGCACCATGCTCTTCTATTCCTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAACTCAAGAATGACCTGAGCATCTGTGGAACCCTCCATTCTGTGGATCAGTATCTCAACATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGTTATCAGTGAAGAACTGCTTCATCCGGGGCTCAGTAGTTCGCTATGTGCAGTTGCCAGCAGATGAGGTCGACACACAGTTGCTACAGGATGCAGCAAGGAAGGAGGCCCTGCAGCAGAAGCAGTGA

Related Sequences

bmy_03135T0 SequenceType object (3)

Length: 159 aa      View alignments
>bmy_03135T0
PRAAILRGAVFHPSEQSAALPAAPARLPPAPRAGWRSSCRQALDLLPPALALPVRRAPGGASTMLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ*