Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VARS ENSTTRG00000014128 (Bottlenosed dolphin)

Gene Details

valyl-tRNA synthetase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013400, Bottlenosed dolphin)

Protein Percentage 73.23%
cDNA percentage 77.12%
Ka/Ks Ratio 0.46844 (Ka = 0.1494, Ks = 0.3189)

VARS ENSBTAG00000005631 (Cow)

Gene Details

valyl-tRNA synthetase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007404, Cow)

Protein Percentage 76.03%
cDNA percentage 79.3%
Ka/Ks Ratio 0.26695 (Ka = 0.1705, Ks = 0.6387)

VARS  (Minke Whale)

Gene Details

valyl-tRNA synthetase

External Links

Gene match (Identifier: BACU015888, Minke Whale)

Protein Percentage 97.98%
cDNA percentage 98.6%
Ka/Ks Ratio 0.41302 (Ka = 0.0104, Ks = 0.0251)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5631 bp    Location:1914020..1938300   Strand:+
>bmy_03136
ATGTCCGTCCTCTACGTCTCTCCTCACCCCGATGCCTTCCCCAGCCTCCGAGCCCTTATAGCTGCTCGCTACGGGGAGGCTGGGGAGGGTCCGGGATGGGGAGGAGCCCACCCCCGCATCTGTCTCCAGCCGCCCCCGACCAGCAGGACTCCCTTTCTGCCACCCCGCCTGCCCGCCCTGGAACAGGGGCCCGGTGGGCTCTGGGTGTGGGGGGCCACTGCTGTGGCCCAGCTGCTGTGGCCAGCAGGCCTGGGGGGCCCTGGGGGTAGTCGGGCAGCCGTCCTCGTCCAACAGTGGGTCAGTTACGCTGACACGGAGCTGATACCAGCTGCCTGTGGGGCAACGCTGCCAGCCTTGGGACTCCGAAGCTCTGGCCAGGACCCCCAGGCTGCACTGGCGGCCCTGGGCAGGGCCCTGGGCCCCTTGGAAGAGTGGCTTAGGCTGCACACCTACTTGGCTGGAGAGGCCCCCACTCTGGGTGACCTGGCGGCTGTCACAGCTTTGCTGCTGCCTTTCCGTTATGTCCTGGACCCCTCTGCCCGCCGGATCTGGGGTAATGTGACTCGCTGGTTTATCACATGTGTCCAGCAGCCAGAATTCCGGGCCGTGCTGGGAGAGGTGGTTCTGTATTCAGGGGCCAGGCCTCTCTCCCAACAGCCAGGCTCTGAGGTCCCTGCACCCCCAAAGACAGCTGCTCAACTCAAGAAAGAGGCAAAGAAACGGGAGAAGCTAGAGAAATTCCAACAGAAGCAGAAGGTCCAACAGCAGCAGCCACCCCCTGGGGAGAAGAAACCAAAACCAGAGAAAAGGGAGAAACGGGATCCTGGGGTCATTACCTATGACCTCCCAACCCCACCTGGAGAAAAGAAAGATGTCAGTGGCACCATGCCTGACTCCTACAGCCCTCAGTTCGTGGAGGCTGCCTGGTACCCTTGGTGGGAGCAACAGGGCTTCTTCAAGCCCGAGTACGGGCGTTCCAGTGTGTCAGCACCAAATCCTCGGGGCGTCTTCATGATGTGCATTCCACCCCCCAACGTGACAGGCTCTCTGCACCTGGGCCACGCGCTCACCAACGCCATCCAGGACTCCCTGACCCGATGGCACCGCATGCGCGGGGAGACCACCCTGTGGAATCCTGGCTGTGACCACGCGGGCATTGCCACCCAGGTGGTGGTGGAGAAGAAACTCTGGCGCGAGCAGGGGCTGAGTCGGCACCAGCTGGGCCGAGAGGCCTTTCTGCGGGAGGTCTGGAAGTGGAAGGAGGAGAAGGGTGACCGGATTTACCACCAGCTGAAGAAGCTTGGCAGCTCCTTGGACTGGAATCGAGCCTGTTTCACCATGGATCCTAAACTGTCAGCAGCCGTGACGGAGGCCTTTGTCCAGCTCCATGAGGAAGGAGTCATCTACCGTAGTACCCGCCTTGTCAACTGGTCCTGCACCCTCAACTCTGCCATCTCGGACATCGAGGTGTGCCCCTTCCCTCCCCGGCTCTCCCCATCTCCACCCCCAGCCCCAGCCCCTGGGCCACTCTTCTTAATCTCCACCTCACAGGTGGATAAGAAGGAGTTGACAGGCCGCACCTTGCTCTCTGTGCCTGGCTACAAGGAGAAGGTGGAGTTTGGGGTCCTCATCTCCTTTGCTTACAAGGTCCAAGACTCAGACAGCGACGAGGAGGTGCTGGTGGCAACAACTCGGATTGAGACGATGCTGGGAGACGTGGCCGTAGCTGTGCACCCCAAAGACCCCAGATACCAGCACCTGAAGGGGAAGAGCGTGATCCACCCATTCGTGTCTCGGATCCTTCCCATCGTCTTCGATGATTTTGTGGACATGGAGTTTGGCACAGGCGCGGTGAAGATCACCCCTGCACACGACCAGAATGACTATGAGGTTGGGCAGCGGCATGGGCTGGAGGCCATCAGCATCATGGACGCCCAAGGGGCCCTTGTCAACGTGCCCCCACCTTTCCTGGGCCTGCCCAGGTTTGAGGCCAGAAAGGCAGTGCTGGCGGCGCTGAAGGAGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAACCGCTCCAAGGACGTGGTGGAGCCTCTCCTGCGGCCGCAGTGGTACGTGCGCTGTGCGGAAATGGCCCAGGCCGCCAGCGCTGCCGTGACACGGGGCGACCTCCGCATCCTGCCCGAGGCCCATCAACGGACGTGGCATGCCTGGATGGACAACATCCGGGACTGGTGCATCTCCCGGCAGCTGTGGTGGGGCCATCGCATCCCAGCCTACTTCGTCACTGTCAGTGACCCAGCTGTACCCCCAGGGGAGGACCCTGATGGGCGGTACTGGGTGAGCGGGCGCACTGAGGCCGAGGCTCTGGAGAAGGCAGCCAAGGAGTTTGGAGTGTCCCCTGACAAGATCAATGAAGACGTACTGGACACCTGGTTCTCCTCTGGCCTCTTCCCCTTCTCCATCCTGGGCTGGCCCAACCAGTCAGAAGATCTGAGTGTGTTCTACCCGGGGACGCTGCTGGAGACGGGCCATGATATCCTCTTCTTCTGGGTGGCCAGGATGGTCATGCTTGGCCTGAAGCTCACTGGCAGGCTGCCCTTCCGAGAGGTCTACCTCCACGCCATCGTGCGGGATGCCCACGGCCGGAAGATGAGCAAGTCTCTAGGCAACGTCATTGACCCCCTGGACGTTATCCACGGAGTCTCTCTGCAGGGCCTCCACGACCAGTTACTGAACAGCAACCTGGATCCCAGCGAGGTGGAAAAGGCTAAAGAAGGGCAGAAGGCAGATTTCCCGGTGGGGATCCCCGAGTGTGGCACCGATGCTCTCCGGTTTGGACTGTGCGCCTACACGTCCCAGGGCCGTGATATCAACCTGGATGTGAACCGGATATTGGGATACCGCCATTTCTGCAACAAGCTCTGGAACGCCACCAAGTTTGCCCTCCGTGGCCTTGGGAAGGATTTTGTGCCTTCACCCACCTCTGAGGTCCATGTCTCAGCTATGCTCCCCACGGACGAGCCCCTGTCCCACCTGGGCCACTCACTGCTGCTGTTGCTGCAGCTGCAGCTACTGCTGCCCCCCGCATCTGCCTTCTTCCCCAATATCTGGAGCCTCCTGGCTGCCCCCGGCTCCATCACCCACCAGGACCTGACCGAGGAGGCGGCACTCAACGTCACCCTGCAGCTCTTCCTGGAGCAGCCGCCCCCAGGTCGGCCCCCCCTTCGCCTTGAGGACTTCCTGGGCCACACCCTCCTTGCCGACAACCTCTTTGCCGCCTACTTTGGACCTCGATCTCCTTCCCGGCGGTTCCGAGCAGCCTTAGGAGAGGTGTCTCGTGCCAATGCCGCCCAGGACTTCCTGCCGACTTCCAGGAATGACCCTGACTTGCACTTTGATGCCGAGCGGCTGGGCCAGGGGCGCACACGCCTGATGGGAGCTCTAGGGGAGACTGTGGTGGCGGCCAGAGCCCTTGACCACACCCTGGCCCGCCAGCGCCTCGGGGCTGCGCTTCATGCCTTGCAGGATTTCTACAGTCACAGCAACTGGGTGGAACTGGGGAAGCAGCAGCCACACCCTCACCTCCTCTGGCCAAGGCAGGGGCTGCGGAACCTGGCACAAGTGGGCGATCCTACCTGCTCCGACTGTGAGGAGTTGAGCTGCCCTGGGAATTTGCTGGGCTTCACACTCCTCACCTCTGGCTACTTTGGAACTCATCCCTCCAAACCTCCAGGGAAATGTAGCCATGGGGGCCATTTTGACCAGAGCAGCTCCCAGCCACCACGGGGAGGCATCAACAAGGATAGCACATCCCCAGGCTTCTCCCCCCACCACATGCTGCACCTCCAGGCCGCAAAACTGGCCCTTCTGGCCTCCATCCAGGCCTTCAGCCTCCTACGAAGCCGCCTGGGAGACAGGGGTTTCTCCAGGCTGCTGGACATCACCCCAGCCTCCAGCCTGAGCTTCGTCCTGGATACCACAGGCAGTATGGGCGAGGAGATCAACGCTGCCAAAATCCAGGCTCGCCACATTGTGGAGCAGCGACGGGGTGGCCCCATGGAGCCCACCCACTATGTCCTGGTGCCTTTCCATGACCCAGGGTTTGGCCCCGTCTTTACAACCAGTGACCCTGACAGCTTCTGGCAACAACTCAATGAGATACATGCCTTGGGAGGTGGAGATGAGCCCGAGATGTGCCTGTCAGCCCTGGAGGATGCCTTTCTCACCAACCGGGTGGAATCGCTGACTCAGGAGCGGCGTTGCAGAGTCACATTCCTGGTGACTGAAGACCCATCTAGGGTTCAGGGCCGACCTCGGCGTGAGGTCTTGTCCCCTCTGCGTTTTGAGCCATATGAAGCAGTGGCACTGGCCTCAGGAGGAGAGGTGATCTTCACCAAAGACCAGTACATTCGGGATGTGGCAGCCATTGTTGGGGACAGCGTAGCTGACCTGGTGACCCTTCCCCTGGAGCCTCCTGTTGTGGTGCCTGAGAGGCCACTTGTGTTCAGTGTGGATGGGCTGCTCCAGAGGGTCACAGTCCGGATCCATGGGGAGGTCAGCAGCTTCTGGATCAGAAACCCTGCAGGGGTCTCCCAGGGCCAGGAGGAAGGTGAGGGGCCTCTAGGTCATACTCGCCGCTTTGGGCAGTTCTGGATGGTGAGCATGAATGACCCCCTGCAGACAGGAACCTGGGAGATCCAGGTCACAGCCAAGGGTACCCCCCGGGTGAGAGTGCAAGCCCAGACCTCCCTGGACTTCCTCTTCCACTTTGGGATCCCCAGGGAGGATGGACCCCACCCTGGCCTCTACCCCCTGACTCAACCAGTTGCAGGTCTCCAGACCCAGCTGTTGGTAGAAGTGACAGGGCTGGTCTCCAGAGGAAACCCTGGAGTTCCTCTGCCGCATTTCTCCCACGTCATCCTTCGAGGGGTCCCGCACGGTGCCGAGCTGGGCCGGGTGCCTTTGGAGCCCATGGGACCCCGCGAGCGAGGTCTCCTCGCTGCCTCGCTACCACCCACGCTTCTGTCCACCGCGGGACCCTTCTCTCTGGAGCTGATTGGCCAGGACGGAGTGGGGCAGGGCCTGCACCGGGCGGCCCCCCAGCCCTGTGCTGTAGTTCCTGTCCTTCTGGAGCTCAGTGGTCCCCCGGGTTTCCTGGCGCCGGGCACCAAGGCCCCGCTCAGCCTCCGCATCGCCAGCTTCTCGGGCCCTCAGGATCTCGATCTTAGGACATACGTCAACCCCAGCTTCGCTCTCACCTCCAACCTCTCCAGGGTTCGCCTGGAACAGAACGAGTCCGCCTGGGGGTGCCTGTGGCTGAAGGTACCAGACACAGCCGCCTCAGACTCCGTGGTGATAGTGACTGTGACCGCGACGGATCGAGAAGCCAGCACAGTGCCCCCGACCCATGCCTTCCTCCGGCTCCTGGTGCTGGGCCCTGCCCCGCAGGACCAGCTCCCTGCCCCTGTCCACTTGACTGACCCTGTCCTCACAACCACCAGCCCTGCCTTTCATCTTTCCACTTTGGTGACTCCGGGCAGGGCTGGGGGAGGGCTGGTGGGCAACCTCTGGTGGGGCACAGTTGGAGCAGTGCTGCTCCTGCTAGGCCTGGCCTCCTGGTGA

Related Sequences

bmy_03136T0 Protein

Length: 1877 aa      View alignments
>bmy_03136T0
MSVLYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFLPPRLPALEQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALGLRSSGQDPQAALAALGRALGPLEEWLRLHTYLAGEAPTLGDLAAVTALLLPFRYVLDPSARRIWGNVTRWFITCVQQPEFRAVLGEVVLYSGARPLSQQPGSEVPAPPKTAAQLKKEAKKREKLEKFQQKQKVQQQQPPPGEKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDSYSPQFVEAAWYPWWEQQGFFKPEYGRSSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLREVWKWKEEKGDRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVQLHEEGVIYRSTRLVNWSCTLNSAISDIEVCPFPPRLSPSPPPAPAPGPLFLISTSQVDKKELTGRTLLSVPGYKEKVEFGVLISFAYKVQDSDSDEEVLVATTRIETMLGDVAVAVHPKDPRYQHLKGKSVIHPFVSRILPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHGLEAISIMDAQGALVNVPPPFLGLPRFEARKAVLAALKERGLFRGIEDNPMVVPLCNRSKDVVEPLLRPQWYVRCAEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRTEAEALEKAAKEFGVSPDKINEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVEKAKEGQKADFPVGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKDFVPSPTSEVHVSAMLPTDEPLSHLGHSLLLLLQLQLLLPPASAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRPPLRLEDFLGHTLLADNLFAAYFGPRSPSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRTRLMGALGETVVAARALDHTLARQRLGAALHALQDFYSHSNWVELGKQQPHPHLLWPRQGLRNLAQVGDPTCSDCEELSCPGNLLGFTLLTSGYFGTHPSKPPGKCSHGGHFDQSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRSRLGDRGFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHIVEQRRGGPMEPTHYVLVPFHDPGFGPVFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALEDAFLTNRVESLTQERRCRVTFLVTEDPSRVQGRPRREVLSPLRFEPYEAVALASGGEVIFTKDQYIRDVAAIVGDSVADLVTLPLEPPVVVPERPLVFSVDGLLQRVTVRIHGEVSSFWIRNPAGVSQGQEEGEGPLGHTRRFGQFWMVSMNDPLQTGTWEIQVTAKGTPRVRVQAQTSLDFLFHFGIPREDGPHPGLYPLTQPVAGLQTQLLVEVTGLVSRGNPGVPLPHFSHVILRGVPHGAELGRVPLEPMGPRERGLLAASLPPTLLSTAGPFSLELIGQDGVGQGLHRAAPQPCAVVPVLLELSGPPGFLAPGTKAPLSLRIASFSGPQDLDLRTYVNPSFALTSNLSRVRLEQNESAWGCLWLKVPDTAASDSVVIVTVTATDREASTVPPTHAFLRLLVLGPAPQDQLPAPVHLTDPVLTTTSPAFHLSTLVTPGRAGGGLVGNLWWGTVGAVLLLLGLASW*