Sequence detailsbmy_03136 (Coding sequence)

Part of scaffold_90 (SequenceType object (1))

For more information consult the page for scaffold_90 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VARSENSTTRG00000014128 (Bottlenosed dolphin)

Gene Details

valyl-tRNA synthetase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013400, Bottlenosed dolphin)

Protein Percentage 73.23%
cDNA percentage 77.12%
Ka/Ks Ratio 0.46844 (Ka = 0.1494, Ks = 0.3189)

VARSENSBTAG00000005631 (Cow)

Gene Details

valyl-tRNA synthetase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007404, Cow)

Protein Percentage 76.03%
cDNA percentage 79.3%
Ka/Ks Ratio 0.26695 (Ka = 0.1705, Ks = 0.6387)

VARS (Minke Whale)

Gene Details

valyl-tRNA synthetase

External Links

Gene match (Identifier: BACU015888, Minke Whale)

Protein Percentage 97.98%
cDNA percentage 98.6%
Ka/Ks Ratio 0.41302 (Ka = 0.0104, Ks = 0.0251)

Additional orthologs identified in other species via the OPTIC pipeline.

Vars (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5631 bp    Location:1914020..1938300   Strand:+
Raw sequence 
>bmy_03136
ATGTCCGTCCTCTACGTCTCTCCTCACCCCGATGCCTTCCCCAGCCTCCGAGCCCTTATAGCTGCTCGCTACGGGGAGGCTGGGGAGGGTCCGGGATGGGGAGGAGCCCACCCCCGCATCTGTCTCCAGCCGCCCCCGACCAGCAGGACTCCCTTTCTGCCACCCCGCCTGCCCGCCCTGGAACAGGGGCCCGGTGGGCTCTGGGTGTGGGGGGCCACTGCTGTGGCCCAGCTGCTGTGGCCAGCAGGCCTGGGGGGCCCTGGGGGTAGTCGGGCAGCCGTCCTCGTCCAACAGTGGGTCAGTTACGCTGACACGGAGCTGATACCAGCTGCCTGTGGGGCAACGCTGCCAGCCTTGGGACTCCGAAGCTCTGGCCAGGACCCCCAGGCTGCACTGGCGGCCCTGGGCAGGGCCCTGGGCCCCTTGGAAGAGTGGCTTAGGCTGCACACCTACTTGGCTGGAGAGGCCCCCACTCTGGGTGACCTGGCGGCTGTCACAGCTTTGCTGCTGCCTTTCCGTTATGTCCTGGACCCCTCTGCCCGCCGGATCTGGGGTAATGTGACTCGCTGGTTTATCACATGTGTCCAGCAGCCAGAATTCCGGGCCGTGCTGGGAGAGGTGGTTCTGTATTCAGGGGCCAGGCCTCTCTCCCAACAGCCAGGCTCTGAGGTCCCTGCACCCCCAAAGACAGCTGCTCAACTCAAGAAAGAGGCAAAGAAACGGGAGAAGCTAGAGAAATTCCAACAGAAGCAGAAGGTCCAACAGCAGCAGCCACCCCCTGGGGAGAAGAAACCAAAACCAGAGAAAAGGGAGAAACGGGATCCTGGGGTCATTACCTATGACCTCCCAACCCCACCTGGAGAAAAGAAAGATGTCAGTGGCACCATGCCTGACTCCTACAGCCCTCAGTTCGTGGAGGCTGCCTGGTACCCTTGGTGGGAGCAACAGGGCTTCTTCAAGCCCGAGTACGGGCGTTCCAGTGTGTCAGCACCAAATCCTCGGGGCGTCTTCATGATGTGCATTCCACCCCCCAACGTGACAGGCTCTCTGCACCTGGGCCACGCGCTCACCAACGCCATCCAGGACTCCCTGACCCGATGGCACCGCATGCGCGGGGAGACCACCCTGTGGAATCCTGGCTGTGACCACGCGGGCATTGCCACCCAGGTGGTGGTGGAGAAGAAACTCTGGCGCGAGCAGGGGCTGAGTCGGCACCAGCTGGGCCGAGAGGCCTTTCTGCGGGAGGTCTGGAAGTGGAAGGAGGAGAAGGGTGACCGGATTTACCACCAGCTGAAGAAGCTTGGCAGCTCCTTGGACTGGAATCGAGCCTGTTTCACCATGGATCCTAAACTGTCAGCAGCCGTGACGGAGGCCTTTGTCCAGCTCCATGAGGAAGGAGTCATCTACCGTAGTACCCGCCTTGTCAACTGGTCCTGCACCCTCAACTCTGCCATCTCGGACATCGAGGTGTGCCCCTTCCCTCCCCGGCTCTCCCCATCTCCACCCCCAGCCCCAGCCCCTGGGCCACTCTTCTTAATCTCCACCTCACAGGTGGATAAGAAGGAGTTGACAGGCCGCACCTTGCTCTCTGTGCCTGGCTACAAGGAGAAGGTGGAGTTTGGGGTCCTCATCTCCTTTGCTTACAAGGTCCAAGACTCAGACAGCGACGAGGAGGTGCTGGTGGCAACAACTCGGATTGAGACGATGCTGGGAGACGTGGCCGTAGCTGTGCACCCCAAAGACCCCAGATACCAGCACCTGAAGGGGAAGAGCGTGATCCACCCATTCGTGTCTCGGATCCTTCCCATCGTCTTCGATGATTTTGTGGACATGGAGTTTGGCACAGGCGCGGTGAAGATCACCCCTGCACACGACCAGAATGACTATGAGGTTGGGCAGCGGCATGGGCTGGAGGCCATCAGCATCATGGACGCCCAAGGGGCCCTTGTCAACGTGCCCCCACCTTTCCTGGGCCTGCCCAGGTTTGAGGCCAGAAAGGCAGTGCTGGCGGCGCTGAAGGAGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAACCGCTCCAAGGACGTGGTGGAGCCTCTCCTGCGGCCGCAGTGGTACGTGCGCTGTGCGGAAATGGCCCAGGCCGCCAGCGCTGCCGTGACACGGGGCGACCTCCGCATCCTGCCCGAGGCCCATCAACGGACGTGGCATGCCTGGATGGACAACATCCGGGACTGGTGCATCTCCCGGCAGCTGTGGTGGGGCCATCGCATCCCAGCCTACTTCGTCACTGTCAGTGACCCAGCTGTACCCCCAGGGGAGGACCCTGATGGGCGGTACTGGGTGAGCGGGCGCACTGAGGCCGAGGCTCTGGAGAAGGCAGCCAAGGAGTTTGGAGTGTCCCCTGACAAGATCAATGAAGACGTACTGGACACCTGGTTCTCCTCTGGCCTCTTCCCCTTCTCCATCCTGGGCTGGCCCAACCAGTCAGAAGATCTGAGTGTGTTCTACCCGGGGACGCTGCTGGAGACGGGCCATGATATCCTCTTCTTCTGGGTGGCCAGGATGGTCATGCTTGGCCTGAAGCTCACTGGCAGGCTGCCCTTCCGAGAGGTCTACCTCCACGCCATCGTGCGGGATGCCCACGGCCGGAAGATGAGCAAGTCTCTAGGCAACGTCATTGACCCCCTGGACGTTATCCACGGAGTCTCTCTGCAGGGCCTCCACGACCAGTTACTGAACAGCAACCTGGATCCCAGCGAGGTGGAAAAGGCTAAAGAAGGGCAGAAGGCAGATTTCCCGGTGGGGATCCCCGAGTGTGGCACCGATGCTCTCCGGTTTGGACTGTGCGCCTACACGTCCCAGGGCCGTGATATCAACCTGGATGTGAACCGGATATTGGGATACCGCCATTTCTGCAACAAGCTCTGGAACGCCACCAAGTTTGCCCTCCGTGGCCTTGGGAAGGATTTTGTGCCTTCACCCACCTCTGAGGTCCATGTCTCAGCTATGCTCCCCACGGACGAGCCCCTGTCCCACCTGGGCCACTCACTGCTGCTGTTGCTGCAGCTGCAGCTACTGCTGCCCCCCGCATCTGCCTTCTTCCCCAATATCTGGAGCCTCCTGGCTGCCCCCGGCTCCATCACCCACCAGGACCTGACCGAGGAGGCGGCACTCAACGTCACCCTGCAGCTCTTCCTGGAGCAGCCGCCCCCAGGTCGGCCCCCCCTTCGCCTTGAGGACTTCCTGGGCCACACCCTCCTTGCCGACAACCTCTTTGCCGCCTACTTTGGACCTCGATCTCCTTCCCGGCGGTTCCGAGCAGCCTTAGGAGAGGTGTCTCGTGCCAATGCCGCCCAGGACTTCCTGCCGACTTCCAGGAATGACCCTGACTTGCACTTTGATGCCGAGCGGCTGGGCCAGGGGCGCACACGCCTGATGGGAGCTCTAGGGGAGACTGTGGTGGCGGCCAGAGCCCTTGACCACACCCTGGCCCGCCAGCGCCTCGGGGCTGCGCTTCATGCCTTGCAGGATTTCTACAGTCACAGCAACTGGGTGGAACTGGGGAAGCAGCAGCCACACCCTCACCTCCTCTGGCCAAGGCAGGGGCTGCGGAACCTGGCACAAGTGGGCGATCCTACCTGCTCCGACTGTGAGGAGTTGAGCTGCCCTGGGAATTTGCTGGGCTTCACACTCCTCACCTCTGGCTACTTTGGAACTCATCCCTCCAAACCTCCAGGGAAATGTAGCCATGGGGGCCATTTTGACCAGAGCAGCTCCCAGCCACCACGGGGAGGCATCAACAAGGATAGCACATCCCCAGGCTTCTCCCCCCACCACATGCTGCACCTCCAGGCCGCAAAACTGGCCCTTCTGGCCTCCATCCAGGCCTTCAGCCTCCTACGAAGCCGCCTGGGAGACAGGGGTTTCTCCAGGCTGCTGGACATCACCCCAGCCTCCAGCCTGAGCTTCGTCCTGGATACCACAGGCAGTATGGGCGAGGAGATCAACGCTGCCAAAATCCAGGCTCGCCACATTGTGGAGCAGCGACGGGGTGGCCCCATGGAGCCCACCCACTATGTCCTGGTGCCTTTCCATGACCCAGGGTTTGGCCCCGTCTTTACAACCAGTGACCCTGACAGCTTCTGGCAACAACTCAATGAGATACATGCCTTGGGAGGTGGAGATGAGCCCGAGATGTGCCTGTCAGCCCTGGAGGATGCCTTTCTCACCAACCGGGTGGAATCGCTGACTCAGGAGCGGCGTTGCAGAGTCACATTCCTGGTGACTGAAGACCCATCTAGGGTTCAGGGCCGACCTCGGCGTGAGGTCTTGTCCCCTCTGCGTTTTGAGCCATATGAAGCAGTGGCACTGGCCTCAGGAGGAGAGGTGATCTTCACCAAAGACCAGTACATTCGGGATGTGGCAGCCATTGTTGGGGACAGCGTAGCTGACCTGGTGACCCTTCCCCTGGAGCCTCCTGTTGTGGTGCCTGAGAGGCCACTTGTGTTCAGTGTGGATGGGCTGCTCCAGAGGGTCACAGTCCGGATCCATGGGGAGGTCAGCAGCTTCTGGATCAGAAACCCTGCAGGGGTCTCCCAGGGCCAGGAGGAAGGTGAGGGGCCTCTAGGTCATACTCGCCGCTTTGGGCAGTTCTGGATGGTGAGCATGAATGACCCCCTGCAGACAGGAACCTGGGAGATCCAGGTCACAGCCAAGGGTACCCCCCGGGTGAGAGTGCAAGCCCAGACCTCCCTGGACTTCCTCTTCCACTTTGGGATCCCCAGGGAGGATGGACCCCACCCTGGCCTCTACCCCCTGACTCAACCAGTTGCAGGTCTCCAGACCCAGCTGTTGGTAGAAGTGACAGGGCTGGTCTCCAGAGGAAACCCTGGAGTTCCTCTGCCGCATTTCTCCCACGTCATCCTTCGAGGGGTCCCGCACGGTGCCGAGCTGGGCCGGGTGCCTTTGGAGCCCATGGGACCCCGCGAGCGAGGTCTCCTCGCTGCCTCGCTACCACCCACGCTTCTGTCCACCGCGGGACCCTTCTCTCTGGAGCTGATTGGCCAGGACGGAGTGGGGCAGGGCCTGCACCGGGCGGCCCCCCAGCCCTGTGCTGTAGTTCCTGTCCTTCTGGAGCTCAGTGGTCCCCCGGGTTTCCTGGCGCCGGGCACCAAGGCCCCGCTCAGCCTCCGCATCGCCAGCTTCTCGGGCCCTCAGGATCTCGATCTTAGGACATACGTCAACCCCAGCTTCGCTCTCACCTCCAACCTCTCCAGGGTTCGCCTGGAACAGAACGAGTCCGCCTGGGGGTGCCTGTGGCTGAAGGTACCAGACACAGCCGCCTCAGACTCCGTGGTGATAGTGACTGTGACCGCGACGGATCGAGAAGCCAGCACAGTGCCCCCGACCCATGCCTTCCTCCGGCTCCTGGTGCTGGGCCCTGCCCCGCAGGACCAGCTCCCTGCCCCTGTCCACTTGACTGACCCTGTCCTCACAACCACCAGCCCTGCCTTTCATCTTTCCACTTTGGTGACTCCGGGCAGGGCTGGGGGAGGGCTGGTGGGCAACCTCTGGTGGGGCACAGTTGGAGCAGTGCTGCTCCTGCTAGGCCTGGCCTCCTGGTGA

Related Sequences

bmy_03136T0 SequenceType object (3)

Length: 1877 aa      View alignments
>bmy_03136T0
MSVLYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFLPPRLPALEQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALGLRSSGQDPQAALAALGRALGPLEEWLRLHTYLAGEAPTLGDLAAVTALLLPFRYVLDPSARRIWGNVTRWFITCVQQPEFRAVLGEVVLYSGARPLSQQPGSEVPAPPKTAAQLKKEAKKREKLEKFQQKQKVQQQQPPPGEKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDSYSPQFVEAAWYPWWEQQGFFKPEYGRSSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLREVWKWKEEKGDRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVQLHEEGVIYRSTRLVNWSCTLNSAISDIEVCPFPPRLSPSPPPAPAPGPLFLISTSQVDKKELTGRTLLSVPGYKEKVEFGVLISFAYKVQDSDSDEEVLVATTRIETMLGDVAVAVHPKDPRYQHLKGKSVIHPFVSRILPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHGLEAISIMDAQGALVNVPPPFLGLPRFEARKAVLAALKERGLFRGIEDNPMVVPLCNRSKDVVEPLLRPQWYVRCAEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDWCISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRTEAEALEKAAKEFGVSPDKINEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVEKAKEGQKADFPVGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKDFVPSPTSEVHVSAMLPTDEPLSHLGHSLLLLLQLQLLLPPASAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRPPLRLEDFLGHTLLADNLFAAYFGPRSPSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRTRLMGALGETVVAARALDHTLARQRLGAALHALQDFYSHSNWVELGKQQPHPHLLWPRQGLRNLAQVGDPTCSDCEELSCPGNLLGFTLLTSGYFGTHPSKPPGKCSHGGHFDQSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRSRLGDRGFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHIVEQRRGGPMEPTHYVLVPFHDPGFGPVFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALEDAFLTNRVESLTQERRCRVTFLVTEDPSRVQGRPRREVLSPLRFEPYEAVALASGGEVIFTKDQYIRDVAAIVGDSVADLVTLPLEPPVVVPERPLVFSVDGLLQRVTVRIHGEVSSFWIRNPAGVSQGQEEGEGPLGHTRRFGQFWMVSMNDPLQTGTWEIQVTAKGTPRVRVQAQTSLDFLFHFGIPREDGPHPGLYPLTQPVAGLQTQLLVEVTGLVSRGNPGVPLPHFSHVILRGVPHGAELGRVPLEPMGPRERGLLAASLPPTLLSTAGPFSLELIGQDGVGQGLHRAAPQPCAVVPVLLELSGPPGFLAPGTKAPLSLRIASFSGPQDLDLRTYVNPSFALTSNLSRVRLEQNESAWGCLWLKVPDTAASDSVVIVTVTATDREASTVPPTHAFLRLLVLGPAPQDQLPAPVHLTDPVLTTTSPAFHLSTLVTPGRAGGGLVGNLWWGTVGAVLLLLGLASW*