Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000014113 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013390, Bottlenosed dolphin)

Protein Percentage 94.81%
cDNA percentage 95.76%
Ka/Ks Ratio 0.42554 (Ka = 0.0192, Ks = 0.0452)

BT.24814 ENSBTAG00000019790 (Cow)

Gene Details

mutS protein homolog 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026367, Cow)

Protein Percentage 95.46%
cDNA percentage 93.82%
Ka/Ks Ratio 0.13713 (Ka = 0.025, Ks = 0.1824)

MSH5  (Minke Whale)

Gene Details

mutS homolog 5

External Links

Gene match (Identifier: BACU015889, Minke Whale)

Protein Percentage 95.47%
cDNA percentage 96.31%
Ka/Ks Ratio 0.56434 (Ka = 0.0323, Ks = 0.0572)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2448 bp    Location:1957958..1938466   Strand:-
>bmy_03137
ATGGCCTCCGTAGGAGCGACCCCAGGCAGGACGCCGCAGGGACCGGGACCTGGGGAGGCCTCGGCCAGCTTCCCTAGCCCGGCCCCAGTGCCGGACCCCCGGGAGGCCGAGGAGGAGGAAGAGGAGGAGCCCGCGGAGATTCATCTGTGTGTGCTGTGGAACTCAGGATACCTGGGCATAGCCTACTATGACACTAGTGACTCCACCATCTACTTTATGCCAGATGCCCCAGACCACGAGAGTCTCAAGCTGCTCCAGAGAGTTCTGGATGAAATCGATCCCCAGTCTGTTGTCACGAGCGCCAAACAGGATGAGAATATGACGCGGTTTCTGGGGAAGCTTGCCTCCCAAGAGCACAGAGAGCCTAAGAGACCTGAAATCATATATTTGCCAAGTGTGGATTTTGGCCTGGAGATAAGCAAACAGCGCCTCCTTTCTGGAAACTACTCCTTCATCCCAGACTCCATGACTGCCACTGAGAAAATCCTCTTCCTCTCCTCCATCATCCCCTTTGACTGCCTCCTCACGGTTCGAGCACTTGGAGGGCTGCTGAAGTTCATGGGTCGAAGAAGAATCGGGGTTGAACTGGAAGACTATAACGTCAGCGTCCCCATCCTAGGCTTTAAGAAATTTGTGTTGACCCATCTGGTGAGCATAGATCAAGACACTTACAGTGTTCTGCAGATATTTAAGAGTGAGCCTCACCCCTCAGTGTACAAAGTGGCCAGTGGACTCAAGGAGGGGCTCAGYCTCTTTGGAATCCTCAACAGATGCCGCTGTAAGTGGGGAGAGAAACTGCTCAGGCTATGGTTCACACGTCCAACCCAGGACCTGGGGGAACTAAATTCCCGTCTGGATGTCATTCAGTTTTTCCTGTTACCCCAGAATCTGGACATGGCTCAGATGCTGCATCGATTGCTGGGTCACATCAAGAACGTGCCTCTGATTCTTAAACGCATGAAGTTGTCCCACACCAAGGTCAGTGACTGGCAGGTTCTCTACAAGACAGTGTACAGTGCCCTGGGCCTGAGGGATGCGTGCCGCTCCCTGCCCCAGTCCATTCAGCTCTTTCGGGACATTGCCCAAGAGTTCTCTGATGACCTACACCACATTGCCAGCCTCATTGGGAAAGTGGTGGACTTTGAGGGCAGTCTTGCTGAAAATCGCTTCACAGTCCTCCCCAGCATAGATCCTGAAATTGATGAGAAAAAACGAAGGCTGACAGGACTTCCCAGTTTCCTCACTGAGGTGGCTCGGAAGGAGCTGGAAAATCTGGACCCCCGTATTCCTTCATGCAGTGTCATCTACATCCCTCTGATTGGCTTCCTTCTTTGTATTCCCCGCCTGCCTTCCATGGTGGAGACCAATGACTTTGAGATTGAGGGTCTGGACTTCATGTTCCTCTCAGAGGAGAAGCTTCACTATCGTAGTGCTCGAACCAAGGAGCTGGATGCATTGCTGGGGGACCTGCACTGCGACATCCGGGACCAGGAGACCCTGCTGATGTACCAGCTGCAGTGTCAGGTGCTGGCACGGGCAGCTGTCTTGACCCGGGTGTTGGACCTTGCCTCCCGCCTGGACGTCCTCTTGGCTCTTGCCAGTGCCGCGCGGGACTATGGCTACTCAAGGCCCCATTACTCCCCACGGCTCCTTGGGGTACGAATCCAGAATGGCAGGCATCCTCTGATGGAACTCTGTGCCCGAACCTTCGTGCCCAACTCCGCAGAATGCGGGGGGTACAAAGGGAGGGTCAAAGTCATCACTGGACCCAACTCCTCAGGGAAGAGCATATACCTCAAACAGGTAGGCTTGATCACATTCATGGCCCTGGTGGGCAGCTTTGTGCCAGCAGAGGAAGCCGAAATCGGGGCAGTAGACGCCATCTTCACCCGAATCCATAGCTGTGAATCCATCTCCCTTGGCCTCTCTACCTTCATGATCGACCTCAACCAGGTGGCGAAAGCAGTGAACAATGCCACCGAGCGGTCGCTGGTCCTTATCGATGAATTCGGAAAGGGAACCAACACGGTGGATGGGCTCGCGCTTCTGGCGGCCGTGATCCGACACTGGCTGGCGCTTGGGCCCACGTGCCCCCACGTCTTCGTGGCCACCAACTTTCTGAGCCTCATTCAGCTACAGCTGCTGCCACAGGGGCCCCTCGTGCAGTATTTGGTTTGCGAAGGTGTTGCCAATGCCAGCCATGCCTCCCACACAGCTGCCCAGGCTGGGCTTCCTGAGAAGCTCGTTGCTCGTGGCAAGGAGGTCTCAGACTTGATCTGCAGTGGAAAGCCCATCAAGCCTGTCAAGGAGCTGCTAAAGGAGAAACAAATGGAAAATTGCCAGACGTTAGTAAACAAGTTTCTGAAACTGGATTTGGAAGATCCCAGTCTGGACCTGGACATTTTCATGAGTCAGGAAGTGCTGCCTGCTGCCACCACCATCCTCTGA

Related Sequences

bmy_03137T0 Protein

Length: 816 aa      View alignments
>bmy_03137T0
MASVGATPGRTPQGPGPGEASASFPSPAPVPDPREAEEEEEEEPAEIHLCVLWNSGYLGIAYYDTSDSTIYFMPDAPDHESLKLLQRVLDEIDPQSVVTSAKQDENMTRFLGKLASQEHREPKRPEIIYLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFLSSIIPFDCLLTVRALGGLLKFMGRRRIGVELEDYNVSVPILGFKKFVLTHLVSIDQDTYSVLQIFKSEPHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLGELNSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSHTKVSDWQVLYKTVYSALGLRDACRSLPQSIQLFRDIAQEFSDDLHHIASLIGKVVDFEGSLAENRFTVLPSIDPEIDEKKRRLTGLPSFLTEVARKELENLDPRIPSCSVIYIPLIGFLLCIPRLPSMVETNDFEIEGLDFMFLSEEKLHYRSARTKELDALLGDLHCDIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPHYSPRLLGVRIQNGRHPLMELCARTFVPNSAECGGYKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATERSLVLIDEFGKGTNTVDGLALLAAVIRHWLALGPTCPHVFVATNFLSLIQLQLLPQGPLVQYLVCEGVANASHASHTAAQAGLPEKLVARGKEVSDLICSGKPIKPVKELLKEKQMENCQTLVNKFLKLDLEDPSLDLDIFMSQEVLPAATTIL*