Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRRC2A ENSTTRG00000014096 (Bottlenosed dolphin)

Gene Details

proline-rich coiled-coil 2A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013368, Bottlenosed dolphin)

Protein Percentage 85.53%
cDNA percentage 85.04%
Ka/Ks Ratio 0.15141 (Ka = 0.0059, Ks = 0.0393)

PRRC2A ENSBTAG00000019682 (Cow)

Gene Details

protein PRRC2A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026236, Cow)

Protein Percentage 95.34%
cDNA percentage 93.81%
Ka/Ks Ratio 0.20136 (Ka = 0.0284, Ks = 0.1412)

PRRC2A  (Minke Whale)

Gene Details

proline-rich coiled-coil 2A

External Links

Gene match (Identifier: BACU015899, Minke Whale)

Protein Percentage 97.76%
cDNA percentage 97.83%
Ka/Ks Ratio 0.60237 (Ka = 0.0181, Ks = 0.03)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6432 bp    Location:2061237..2045802   Strand:-
>bmy_03152
ATGTCCGATCGCTCGGGGCCGACTGCCAAGGGGAAGGATGGAAAAAAGTATTCCTCGCTCAACCTGTTTGATACATATAAGGGCAAGTCCTTAGAGATCCAGAAACCCGCTGTTGCCCCTCGCCATGGCCTGCAGAGTCTCGGGAAAGTTGCCATTGCTCGGCGTATGCCACCCCCAGCCAACCTTCCAAGCCTGAAAGCCGAGAACAAAGGCAATGACCCCAACGTCTCACTAGTGCCGAAAGACGGAACAGGATGGGCAAGCAAACAGGAGCAGTCCGACCCCAAGAGTTCCGATGCCTCAACCGCTCAGCCGCCGGAATCGCAGCCACTGCCGGCTTCACAGACGCCTGCCTCCAACCAACCGAAACGACCCCCAGCAGCCCCCGAGAACACTCCTTCGGTTCCAAGCGGGGTAAAGTCCTGGGCACAGGCCAGTGTCACCCATGGAGCACATGGAGATGGTGGAAGGGCATCAAGCCTACTGTCACGATTCTCTCGAGAGGAATTTCCGACCCTGCAGGCGGCTGGCGACCAGGACAAGGCTGCCAAGGAAAGGGAGTCTGCCGAACAGTCGTCTGGGCCCGGACCAAGCCTCCGCCCCCAAAATTCTACAACTTGGAGGGACGGAGGTGGGCGTGGCCCTGATGAGCTGGAGGGCCCGGACTCCAAACTTCATCACGGCCATGATCCCCGGGGTGGGCTGCAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGGAATGATGCCGCCTTTCATGTATCCCCCATATCTCCCGTTCCCTCCGCCCTATGGACCCCAGGGGCCTTACCGATACCCCACTCCTGATGGGCCCGGCCGTTTCCCCCGTGTGGCAGGCCCCCGAGGTTCAGGGCCGCCAATGCGCCTTGTAGAACCTGTGGGTCGGCCTTCCATTCTTAAAGAAGATAATCTCAAAGAATTTGATCAGTTGGACCAGGAGAATGATGATGGTTGGGCAGGGGCCCACGAGGAGGTCGACTACACTGAGAAGCTCAAGTTCAGCGATGAGGAAGACGGGCGAGACTCCGATGAGGAGGGAGCTGAGGGCCACAAGGAATCCCAGTCAGCTGCTGGTGAGGAACGGCCCCCTGAAGCAGATGGCAAAAAGGGCAACTCCCCCGGCAGCGAACCACCCCCTCCCAAGACGGCCTGGGCAGAGACCTCTCGGCCTCCAGAGACAGAGCCGGGGCCTCCTGCCCCAAAGCCTCCCCCACCCCCACCTCACCGGGGCCCCACCGGGAACTGGGGCCCCCCTGGGGACTACCCAGATCGCGGGGGCCCTCCCTGCAAGCCCCCAGCACCCGAAGATGAGGATGAGGCTTGGCGGCAGCGGCGAAAGCAGTCTTCGTCTGAAATCTCCCTGGCTGTGGAGCGAGCCCGGCGACGGCGAGAGGAGGAGGAACGGCGCATGCAGGAGGAACGCAGGGCAGCCTGTGCCGAGAAACTCAAGCGACTCGATGAGAAGTTTGGGGCACCTGACAAGCGGCTCAAATCGGAGCCTGTTGTACCACCTGCTGCCCCTCCTGCCCCCGTTCCACCACCTGCAGCCCCCAAAGAACTCCCTGCACCTCCAGCTCCTCCACCGGCACCAGTCCCGACACCTGAAAAAGAACCGGAAGAGCCGGCACAGGCCTCTCCTGCCCAGTCCACCCCCACTCCAGGTGTGGCTCCAGCTCCCACCGTGGTGAGTGGTGGTGGCAGCACCAGTAGCACCAGCAGTGGCAGCTTCGAAGCCAGCCCAGTGGAACCCCAACTGCCCTCAAAAGAGGGTCCTGAACCACCAGAAGAGGTTCCTTCTCCTGCCACGCCCCCAGCCCCAAAGGTGGAGCCCAAGGGTGATGGGGTTGGTCCTACCCGTCAGCCCCCCAGCCAAGGCTTGGGCTACCCCAAGTATCAGAAATCATTGCCTCCTCGTTTCCAGCGGCAGCAGCAGGAGCAGCTCTTGAAGCAGCAACAGCAGCAGTGGCAGCAGCATCAACAGGGCTCCGCCCCACCTGCCCCAGTGCCCCCATCACCACCACAGCCTGTGACCATGGGGGCTGTGCCAGCTCCACAGGCTCCGCCACCACCCCCCAAGGCCCTGTACCCAGGTGCTCTGGGCCGGCCCCCACCCATGCCCCCTATGAACTTTGATCCCCGCTGGATGATGATTCCTCCTTATGTGGACCCCCGGCTCCTTCAGGGCCGGCCCCCTCTGGACTTCTATCCTCCTGGTGTGCATCCCTCTGGCCTAGTTCCCCGGGAGCGCTCAGACAGTGGAGGCTCAAGCTCAGAGCCATTTGAGCGCCATGCACCCCCCCTCTTACGGGATCGTGGCACCCCACCAGTGGATCCAAAGTTGGCCTGGGTAGGAGATGTCTTCACCACCACACCTGCTGACCCCCGCCCACTTACCTCACCACTGCGCCAGGCTGCTGACGAGGATGAGAAGGGGATGAGGAGCGAGACCCCTCCAGTACCTCCCCCACCACCCTATCTGGCCAGTTATCCAGGCTTTCCTGAGAATGGAGCCCCTGGGCCCCCAATCCCTCGCTTCCCTCTGGAGGAGCCAGCTCCCCCAGGGCCCCGTCCACTCCCCTGGCCCCCAGGCAATGATGAGGCAGCCAAGATACAAGCTCCACCACCTAAAAAGGAAACCCCCAAGGAGGAGACTCCACAGCTGACCGGGCCAGAAGCTGGTCGAAAGCCTGCCCGTGGAATCGGAGGCCAAGGCCCCCCACCACCTCGCAGAGAGAGCCGCACTGAGACCCGCTGGGGCCCTCGTCCAGGCAGCAGTCGTCGTGGAATCCCTCCAGAGGAGCCAGGGGCCCCTCCCCGCCGCGCTGGGCCCATCAAGAAACCCCCACCGCCTGCAAAAGTTGAAGATCTGCCCCCCAAGCCCCTCGAACAGGGGGATGAAACCCCCAAGGTTCCAAAGCCAGACCCGTTGAAGACGGCAAAGGGGAAGATAGGTGGCCCCAAGGAGACCCCACCCAGTGGGACTCTTTCCCCTGCCCCAAGGCTTCGGAGGGACTATTCCTATGAGAGAGTGGGTCCTACCTCTTGCCGGGGTCGGGGCCGAGGGGAGTATTTTGCCAGAGGGAGGGGTTTTCGGGGCACCTATGGGGGACGGGGGCGGGGAGCCCGAAGCCGAGAGTTCCGTAGTTACCGGGAATTCCGAGGAGATGATGGGCGTGGAGGTGGGGCAGGGGGACCAAACCATCCTCCTGCTCCCCGAGGCCGCACTGCCAGCGAGACACGGAGTGAGGGTTCAGAGTATGAAGAAATCCCCAAGCGGCGCCGGCAGCGGGGTTCAGAGACAGGCAGCGAGACCCATGAGAGTGATCTGGCTCCCTCAGATAAGGAGGCCCCGACACCCAAGGAAGGAGTACTTATACAGGTTCCTCTTGCTCCCCCACCATCAGGAGCACCCCCTTCACCAGCCCCAGCCCGCTTTTCCACTGCCCGAGGTGGACGAGTCTTCACTCCCAGAGGGGTGCCATCACGCCGGGGTCGAGGGGGAGGGCGGCCCCCTCCCCCCATTTGCCCAGGCTGGAGCCCCCCAACCAAGTCTCTGGCTCCAAAGAAGCCTCCAACAGGTCCTTTGCCTCCAAGTAAGGAGCCTTTGAAAGAGAAGCTGATCCCAGGGCCCCTGTCCCCCATGGCCCGAGGAGGCAGCAGTGGAGGCAGCAACGTAGGCATGGGTGTGGAAGATGGAGAGCGGCCTAGAAGGAGGCGACATGGGAGGGCTCAGCAGCAGGACAAACCGCCTCGTTTCCGGAGACTGAAACAGGAACGGGAGAACGCTGCCAGGGGGGCCGAGGGCAAGTCCTCTTCCCTTGCCCTTCCAGTCTCCACTCCTGGACCAGAGGAGGCCCTCACAGCGGTAGCAGTGCCCCCACCACCTCGCCGGGCAGCTGCTAAGTCTCCCGATCTGTCAAACCAGAACTCAGACCAAGCCAATGAGGAATGGGAGACTGCCTCAGAGAGCAGTGACTTTGCCAGTGAGCGCCGGGGGGACAAGGAGGCTCCGCCAGCAGCACTGCTAACCCCCAAAGCTGTGGGGACTCCTGGGGGCAGTGGAGGTGGAGCTGGACCAGGCATTTCAGCCATGTCCCGTGGAGAGCTGAGCCAGAGAGCGAAAGATTTGAGCAAGCGGAGCTTCTCGAGTCAGCGGCCAGGCATGGAAAGGCAGAACCGGCGCCCAGGCCCAAGCAGCAAGTCTGGCAGTGGTGGCGGCAGCAGTGGAGGAGGTGGCGGGGGTCCTGGAGGGAGAACTGGCCCAGGGCGAGGGGACAAGAGGAGCTGGCCCTCTCCCAAGAACCGAAGCCGTCCTCCAGAGGAGCGTCCCCCAGGGCTCCCTCTGCCTCCCCCACCCCCCAGCAGTTCTGCTGTCTTCCGCCTGGACCAAGTTATCCACAGCAACCCTGCTGGCATCCAACAGGCTCTGGCCCAGCTCAGCAGCCGCCAAGGAAGTGCAGCTGCACCAGGGGGGCACCCAAGGCCCAAGCCTGGGCCTCCCCAAACCCCCCAAGGCCCCTCCCCTCGGCCCCCAACCCGGTATGACCCTCAGAGGGCCAACAACAATGACGTCAATTCGGACCCCCACTTGGAGGAGCCAGGGCCGATGGTCAGGGGGGTGGGCGGGACTCCCCGGGACTCTGCCGGGGTTAATCCCTTCCCCCCCAAACGGCGAGAGCGGCCTCCCAGAAAACCGGAGCTGCTGCAGGAGGAATCTTTGCCACCTTCTCATAGCTCTGGATTCTTGGGCCCCAAACCTGAGGGCCCAGGCCCTCAGGGAGAGTCCAGAGATGCAGGAACAGAAGCCCTGACCCCTCACCTCTGGAATCGTATACATACTGCCACTAGCCGGAAGAGTTACCAGCCTGGCTCCATGGAGCCTTGGATGGAACCCCTGAGTCCTTTTGAGGATGTGGCTGGCACGGAGATGAGTCAGTCTGACAGTGGGGTGGACCTGAGTGGGGATTCTCAGGTGTCATCAGGTCCCTGCAGCCAGCGAAGTTCCCCTGATGGAGGACTCAAGGGGGCAGCAGAGGGGCCCCCCAAGCGGTCTGGAGGCCCCTCCCCCCTGAATGCTGTTCCTGGTGAGGGTCCACCTGGCTCTGAACCCTCTGAACCTCCTAGGAGACGGCCACCTGCCCCCCACGATGGAGACAGAAAGGAGCTGCCCCGGGAGCAGCCTCTGCCCCCTGGGCCCATTGGCACAGAACGATTGCAGCGTACAGACCGGGGCCCAGAGCCTGGCTCCCTCCGGCCATCCCATCGACCTGGTCCTCCGGTCCAGTTTGGTACCAATGACAAGGACTCGGACTTGTGCCTAGTGGTGGGAGACAGTTTAAAAGCAGAGAAGGAGCTAACGGTATCAGTCACTGAGGTTTCGGGGGGAGCCATAGACTCTCAGCTACATCCCAACAATGGAGGTTTCCGCCCTGGGACACCCTCATTGCACCCTTACAGATCACAGCCCCTGTACCTCCCCCCAGGCCCAGCCCCACCCTCGGCACTGCTCTCTGGGGTAGCTGTCAAGGGCCAGTTTCTGGATTTCTCCACACTGCAAGCAACAGAGCTGGGGAAGTTGCCAGCTGGAGGAGTTCTCTACCCTCCACCTTCCTTCCTCTACTCTCCAGCTTTCTGCCCTAGCCCTTTGCCAGACCCACCCTTGCTTCAGGTGCGACAGGATCTGCCATCCCCTTCAGATTTTTATTCTCCTCCTCTGCAACCTGGTGGCCAAAGTGGCTTCCTCCCCTCAGGGGCCCCTGCCCAGCAGATGCTTCTACCCATGGTGGACTCTCAGCTGCCTGTGGTGAACTTCAGCTCCCTGCCACCAGCGCCGCCTCCTGCCCCACCCCCCCTTTCTCTGTTACCTGTGGGCCCTGCTCTGCAGCCCCCCAGCCTGGCTGTGCGGCCCCCACCTGCTCCTGCTACTCGGGTGCTGCCTTCACCTGCCAGGCCCTTCGGCCCTAGCTTGGGGCGAGCAGAGCTGCACCCAGTAGAACTAAAGCCGTTCCACGATTATCGAAAACTGAACAGCAACCTTGGGGGACCTGGGTCATCACGTACTCCTCCAGCTGGAAGGCAAGAGAAGGGAATGGGGATGCAGACTGCCTATCCATCCCCAAGGACTTACTTTCTTTGGGGACCAGGGGCGGGTCTTAAGGTTGCCTCAAATGCCATTCCTCCTTTAGGTCTTTCTCTGGCCTCAACTCCCGCCCCACCTTCCACCTACAGCGGAGTCTTCCGCACCCAGCGCATCGACCTCTACCAGCAGGCCTCCCCACCAGATGCCCTGCGCTGGACGCCGAAGCCTTGGGAGCGGACGGGGCCACCTTCTAGAGAAGGGCCGTCCCGAAGGGCAGAGGAGCCTGGGTCCCGAGGGGACAAGGAGCCTGGATTGCCCCCACCCTGCTGA

Related Sequences

bmy_03152T0 Protein

Length: 2144 aa      View alignments
>bmy_03152T0
MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRMPPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQTPASNQPKRPPAAPENTPSVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQPSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPGRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGHKESQSAAGEERPPEADGKKGNSPGSEPPPPKTAWAETSRPPETEPGPPAPKPPPPPPHRGPTGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKSEPVVPPAAPPAPVPPPAAPKELPAPPAPPPAPVPTPEKEPEEPAQASPAQSTPTPGVAPAPTVVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPSPATPPAPKVEPKGDGVGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQQWQQHQQGSAPPAPVPPSPPQPVTMGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFERHAPPLLRDRGTPPVDPKLAWVGDVFTTTPADPRPLTSPLRQAADEDEKGMRSETPPVPPPPPYLASYPGFPENGAPGPPIPRFPLEEPAPPGPRPLPWPPGNDEAAKIQAPPPKKETPKEETPQLTGPEAGRKPARGIGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPAKVEDLPPKPLEQGDETPKVPKPDPLKTAKGKIGGPKETPPSGTLSPAPRLRRDYSYERVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGAGGPNHPPAPRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGVLIQVPLAPPPSGAPPSPAPARFSTARGGRVFTPRGVPSRRGRGGGRPPPPICPGWSPPTKSLAPKKPPTGPLPPSKEPLKEKLIPGPLSPMARGGSSGGSNVGMGVEDGERPRRRRHGRAQQQDKPPRFRRLKQERENAARGAEGKSSSLALPVSTPGPEEALTAVAVPPPPRRAAAKSPDLSNQNSDQANEEWETASESSDFASERRGDKEAPPAALLTPKAVGTPGGSGGGAGPGISAMSRGELSQRAKDLSKRSFSSQRPGMERQNRRPGPSSKSGSGGGSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSAAAPGGHPRPKPGPPQTPQGPSPRPPTRYDPQRANNNDVNSDPHLEEPGPMVRGVGGTPRDSAGVNPFPPKRRERPPRKPELLQEESLPPSHSSGFLGPKPEGPGPQGESRDAGTEALTPHLWNRIHTATSRKSYQPGSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRSGGPSPLNAVPGEGPPGSEPSEPPRRRPPAPHDGDRKELPREQPLPPGPIGTERLQRTDRGPEPGSLRPSHRPGPPVQFGTNDKDSDLCLVVGDSLKAEKELTVSVTEVSGGAIDSQLHPNNGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVAVKGQFLDFSTLQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPDPPLLQVRQDLPSPSDFYSPPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFSSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFGPSLGRAELHPVELKPFHDYRKLNSNLGGPGSSRTPPAGRQEKGMGMQTAYPSPRTYFLWGPGAGLKVASNAIPPLGLSLASTPAPPSTYSGVFRTQRIDLYQQASPPDALRWTPKPWERTGPPSREGPSRRAEEPGSRGDKEPGLPPPC*