Part of scaffold_90 (SequenceType object (1))

For more information consult the page for scaffold_90 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LTBENSTTRG00000014088 (Bottlenosed dolphin)

Gene Details

lymphotoxin beta (TNF superfamily, member 3)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013356, Bottlenosed dolphin)

Protein Percentage 97.93%
cDNA percentage 97.24%
Ka/Ks Ratio 0.08146 (Ka = 0.0089, Ks = 0.1087)

LTBENSBTAG00000020674 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027554, Cow)

Protein Percentage 67.09%
cDNA percentage 74.07%
Ka/Ks Ratio 0.28797 (Ka = 0.2493, Ks = 0.8659)

LTB (Minke Whale)

Gene Details

lymphotoxin beta (TNF superfamily, member 3)

External Links

Gene match (Identifier: BACU015901, Minke Whale)

Protein Percentage 93.87%
cDNA percentage 95.13%
Ka/Ks Ratio 0.37057 (Ka = 0.0382, Ks = 0.103)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 708 bp    Location:2096109..2097306   Strand:+
>bmy_03155
GTAACAGGGACCGCTGACCCAGGCGCCCAAGCACAGGCCCATCAGCGATTTGGTGACTACACGTGGGTGGCCGCCCTGCCCCCAACCGTGGACTCTTCGCCCCTTCCAGAGTCCGGGGAGCTGCCGGTGGAGGAGGAGGCAGAAACAGATCTCAGCCCCAGGCTCCCGGCTGCCCACCTCATTGAAGTCCCGGGCCTGGATCACTCCTTTCAGGATCGGATTTCCGAGAGCCAACCGGCCCGTTTCTCTGCAGGCGCTTGGACCAGGGGGCAGGGGCTAGGCTGGGAGGCGAAGAAAGAAGAGGCGTTTCTGAGGAGCGGGACGCAGTTCTCGGGCGCCGAGGGTCTGGCCCTGCCGCAGGACGGCCTCTATTACCTCTACTGTCACGTCGGCTACCGGGGCCGCGCGCCCCCTCCCGGCGGGGACCCCCTGGACCGCTCGGTCACGCTGCTCAGCCGGCTGTACCGGGCGGGGGGCGCCTATGGATCGGGGAGTCCCGAGCTGCTGCTCGAGGGCGCGGAGACCGTGACCCCGGTCTTGGACCCCGCCCGGAGGCACGAGTACGGGCCCCTCTGGTACACGAGCGTGGGGTTCGGTGGCCTGGTGCAGCTCCGGAGGGGCGAGAGAGTGTACGTCAATATCAGTCACCCCGATATGGTGGACTACAGGAGAGGAAAGACCTTCTTTGGGGCGGTGATGGTGGGGTGA

Related Sequences

bmy_03155T0 SequenceType object (3)

Length: 236 aa      View alignments
>bmy_03155T0
VTGTADPGAQAQAHQRFGDYTWVAALPPTVDSSPLPESGELPVEEEAETDLSPRLPAAHLIEVPGLDHSFQDRISESQPARFSAGAWTRGQGLGWEAKKEEAFLRSGTQFSGAEGLALPQDGLYYLYCHVGYRGRAPPPGGDPLDRSVTLLSRLYRAGGAYGSGSPELLLEGAETVTPVLDPARRHEYGPLWYTSVGFGGLVQLRRGERVYVNISHPDMVDYRRGKTFFGAVMVG*