Sequence detailsbmy_03164 (Coding sequence)

Part of scaffold_91 (SequenceType object (1))

For more information consult the page for scaffold_91 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF25ENSTTRG00000010815 (Bottlenosed dolphin)

Gene Details

ring finger protein 25

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010256, Bottlenosed dolphin)

Protein Percentage 96.15%
cDNA percentage 97.35%
Ka/Ks Ratio 0.43959 (Ka = 0.0201, Ks = 0.0456)

BT.45858ENSBTAG00000003817 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF25

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004972, Cow)

Protein Percentage 89.41%
cDNA percentage 92.34%
Ka/Ks Ratio 0.38965 (Ka = 0.0578, Ks = 0.1483)

RNF25 (Minke Whale)

Gene Details

ring finger protein 25

External Links

Gene match (Identifier: BACU012708, Minke Whale)

Protein Percentage 98.88%
cDNA percentage 99.18%
Ka/Ks Ratio 0.34654 (Ka = 0.0054, Ks = 0.0157)

Additional orthologs identified in other species via the OPTIC pipeline.

RNF25 (Human)   Rnf25 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1338 bp    Location:45138..49020   Strand:+
Raw sequence 
>bmy_03164
GTCCTTCCCTCTGAAGTTGAAGTGTTAGAGTCTATCTATCTGGATGAACTACAGGTGGTCAAAGGAAATGGCAGATCATCACCATGGGAGATCTACATCACCCTGCACCCCGCCACTGCAGAAGACCAGGATTCACAGTATGTCTGCTTCACTCTGGTGCTTCGGGTCCCAGCACAGTATCCCCATGAGGTGCCACAGATCTCTATCCGTAACCCCCGAGGACTCTCAGATGAACAGATCCACAAGATCTCACAGGCGCTGAGCCACATGGCTGAGGCTGGGCTGGGTACTGCCATGCTCTATGAACTCATCGAGAAAGGGAAGGAAATTCTCACAGATAACAACATCCCCCATGGCCAGTGCGTCATCTGCCTCTATGGTTTCCAGGAGAAGGAGGCCTTTACCAAAACAACCTGTTACCACTACTTCCACTGCCACTGCCTGGCTCGGTACATCCAGCACATGGAGCAGGAGCTGCAGGCCCAGGGACGGGAGCAGGAACAGGAATGGCAGCACGCTGCAACCAGACAGAAGGCCGTTGGTGTGCAGTGCCCGGTGTGCAGAGAGCCACTCGTGTACGATCTTGCCTCGCTGAAAGCAGCCCCTGAACCCCAGCAGCCCGTGGAGCTGTACCAGCCCGATGCAGAGAGCTTGCGCCAGCAAGAAGAGCGTAAGAGGCTCTACCAGAGACAGCAGGAGAGGGGGGGCATCATTGACCTCGAGGCTGAGCGTAACCGGTACTTCATCCGCCTCCAGCAGCCTCCTGCCCCTTTGGAACCCGAGTCAGCTGTAGATGCCTCCGGAGGATCCCACCCACCCAGTACCCTTGCCACCGAACAGTCCACCTCATCAACTGCTCAGACCACCCTGTCAGCGCCTCTGCCTGTGGCCTCCCAGTACACATGTGAGAAGATTCCAGGGGCTGGGCCAAATCAGCAAAAGCTGGGTGAGACCCAGAAAGCTATGCTAGATCCTCCCCGGGCCAGTCGAGGTCCCTGGAGACAGCCCGAACGGAGGCACCTAAAAGGAGGGGAGTGCAATGCCCTCAAAGGTACCAGTGACACCCAGGAACTGCCACCTCCTGAGGGGCCCCTCAAGGAGCCCATGAACCTAAAGCCAGAGTCCTGTAACCAAGGGGTTGAAGGTCCTCCCCAGGAAAAGGGGCATGGCAACTGGCAGGGTCCCCCGCCCCGCAGGACTCGCGACTGTGCCCGCTGGGAGCGCTCCAAGGGTCGGACACCGGCTTCTTCCTACCCCCGCCTGCCTCGGGGTCGGGGAGCCTACCGGCCTGGTCCTCGAAGAGAGCCCATGAGCCTCGAATCGGAGGATGGTTCCTAG

Related Sequences

bmy_03164T0 SequenceType object (3)

Length: 446 aa      View alignments
>bmy_03164T0
VLPSEVEVLESIYLDELQVVKGNGRSSPWEIYITLHPATAEDQDSQYVCFTLVLRVPAQYPHEVPQISIRNPRGLSDEQIHKISQALSHMAEAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEAFTKTTCYHYFHCHCLARYIQHMEQELQAQGREQEQEWQHAATRQKAVGVQCPVCREPLVYDLASLKAAPEPQQPVELYQPDAESLRQQEERKRLYQRQQERGGIIDLEAERNRYFIRLQQPPAPLEPESAVDASGGSHPPSTLATEQSTSSTAQTTLSAPLPVASQYTCEKIPGAGPNQQKLGETQKAMLDPPRASRGPWRQPERRHLKGGECNALKGTSDTQELPPPEGPLKEPMNLKPESCNQGVEGPPQEKGHGNWQGPPPRRTRDCARWERSKGRTPASSYPRLPRGRGAYRPGPRREPMSLESEDGS*