Part of scaffold_91 (Scaffold)

For more information consult the page for scaffold_91 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VIL1 ENSTTRG00000010749 (Bottlenosed dolphin)

Gene Details

villin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010218, Bottlenosed dolphin)

Protein Percentage 85.69%
cDNA percentage 87.75%
Ka/Ks Ratio 0.56414 (Ka = 0.0267, Ks = 0.0474)

VIL1 ENSBTAG00000018543 (Cow)

Gene Details

villin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024683, Cow)

Protein Percentage 91.01%
cDNA percentage 91.95%
Ka/Ks Ratio 0.1576 (Ka = 0.0427, Ks = 0.2712)

VIL1  (Minke Whale)

Gene Details

villin 1

External Links

Gene match (Identifier: BACU012703, Minke Whale)

Protein Percentage 98.59%
cDNA percentage 98.88%
Ka/Ks Ratio 0.26707 (Ka = 0.007, Ks = 0.0264)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1704 bp    Location:250656..218009   Strand:-
>bmy_03171
ATGCCGGCCATGCAGATGGTGCCTGTTCCTTCCAGCACCTTCGGCAGCTTCTTCAACGGTGACTGCTACATAGTCCTGGCTATCCACAAGACAGGCAGCAACCTGTCCTATGACATTCATTACTGGATCGGCCAGGATTCGTCCCAGGATGAGCAAGGGGCAGCTGCCATCTACACCACACAGATGGATGACTTTCTGAAGGGCCGGGCTGTCCAGCACCGCGAGGTCCAGGGCAACGAGAGCGAGACCTTCCGAGGCTACTTCAAGCAGGGCATTGTGATCCGGAAAGGGGGTGTGGCTTCTGGCATGAAACAAGTGGAGACCAACTCCTATGACATCCAGCGGCTGCTACATGTCAAGGGCAAGAGGAATGTGGTGGCCGGAGAGCAGCTCTTCCAGAAGTGGACAGTGCCCAACCGGACCTCAGGCCTGGGCAAAACCCATGCCGTGGGCTCCGTGGCTAGGGTGGAACAGGTGAAGTTTGATGCCACGTCCATGCACGTCCAGCCTCAGGCGGCTGCCCAGCAGAAGATGGTCGACGATGGGAGTGGGGAGGTGCAGGGCAGCCAGGCCAGCCGGGATGAAATCACAGCCTCGGCCTATCAAGCGGTCATCCTGGACCAGCAGTACAACAATGAACCAGTCCAGATCCTGGTCCCGATGGGCAAGGAGCCACCTCACCTCATGTCCATCTTCAAAGGACGCATGGTGGTCTACCAGGGAGGCACCTCTCGGGCTAACAGCGTGGAGCCTGTGCCCTCCACACGGCTGTTCCAGGTCCGGGGGACCAACACCAACAACACCAAGGCCTTTGAGGTCCCAGCCAGGGCCACCTCCCTCAACTCCAATGACGTCTTCATCCTCAAGACCCAGTCTTGCTGCTACCTGTGGTGTGGGAAGGGTTGTAGTGGGGACGAGCGGGAAATGGCCAAGATGGTTGCTGACACCATCTCCCGGACCGAGAAACAAGTGGTGGTGGAAGGGCAGGAGCCGGCCAACTTCTGGATGGCCCTGGGCGGGAAGGCCCCCTATGCCAGCACCAAGAGGCTGCAGGAGGAAACTCTGGTGATCACTCCTCGGCTCTTTGAATGTTCCAACCAGACCGGGCGCTTCCTGGCCACAGAGATCCCTGACTTCAATCAGGATGACTTGGAAGAGGATGATGTGTTCCTGCTAGATGTCTGGGACCAGGTCTTTTTCTGGATTGGAACGAATGCTAATGAGGCCGAGAAGAAAGCTGCAGCCACCACAGTGCAGGAATACCTCAAGACCCACCCCAGCGGCCGGGACCCCGAGACCCCCATCATTGTGGTGAAGCAAGGACACGAGCCCCCCACATTCACGGGCTGGTTCCTGGCTTGGGATCCCTTCAAGTGGAGTAACGCCAAATCCTATGAGGCCCTGAAGGCGGAGCTTGGAAACTCTGGAGACTGGGGCCAGATCATTGATGAGCTCACAAACCCTAAACTAGACGTGTTCAACGCTAACAGCAATATCAGTTCTGGGCCTCTACCCATCTTTCCCCTGGAGCAGCTGGTGAACAAGCCTGTGGAGGAGCTTCCCGAGGGTGTGGATCCCAGCAGGAAGGAGGAACACCTGTCTGTTGAGGATTTCACCAAGGCCTTGGGGATGACTCCTGCTGCCTTCTCTGCTCTGCCTCGATGGAAGCAACAAAACCTCAAGAAAAAAAAAGGACTATTTTGA

Related Sequences

bmy_03171T0 Protein

Length: 568 aa      View alignments
>bmy_03171T0
MPAMQMVPVPSSTFGSFFNGDCYIVLAIHKTGSNLSYDIHYWIGQDSSQDEQGAAAIYTTQMDDFLKGRAVQHREVQGNESETFRGYFKQGIVIRKGGVASGMKQVETNSYDIQRLLHVKGKRNVVAGEQLFQKWTVPNRTSGLGKTHAVGSVARVEQVKFDATSMHVQPQAAAQQKMVDDGSGEVQGSQASRDEITASAYQAVILDQQYNNEPVQILVPMGKEPPHLMSIFKGRMVVYQGGTSRANSVEPVPSTRLFQVRGTNTNNTKAFEVPARATSLNSNDVFILKTQSCCYLWCGKGCSGDEREMAKMVADTISRTEKQVVVEGQEPANFWMALGGKAPYASTKRLQEETLVITPRLFECSNQTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGTNANEAEKKAAATTVQEYLKTHPSGRDPETPIIVVKQGHEPPTFTGWFLAWDPFKWSNAKSYEALKAELGNSGDWGQIIDELTNPKLDVFNANSNISSGPLPIFPLEQLVNKPVEELPEGVDPSRKEEHLSVEDFTKALGMTPAAFSALPRWKQQNLKKKKGLF*