Sequence detailsbmy_03172 (Coding sequence)

Part of scaffold_91 (SequenceType object (1))

For more information consult the page for scaffold_91 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTDSP1ENSBTAG00000008362 (Cow)

Gene Details

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011010, Cow)

Protein Percentage 99.62%
cDNA percentage 94.74%
Ka/Ks Ratio 0.00514 (Ka = 0.0017, Ks = 0.3232)

Additional orthologs identified in other species via the OPTIC pipeline.

CTDSP1 (Human)   Ctdsp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 786 bp    Location:256936..252527   Strand:-
Raw sequence 
>bmy_03172
ATGGACAGCTCGGCCGTCATTACTCAGATCAGCAAGGAGGAAGCGCGGAGCCCGCTACGGAGCAAAGGTGACCAGAAGTCAGCAGCTTCTCAGAAGCCCCGGAGTCGGGGCATCCTCCACTCACTTTTCTGCTGCGTCTGCCGGGATGATGGGGAGGCCCTGCCCGCCCACAGTGGGGCGCCCCTGCTCGTGGAGGAGAACGGTGCTGTCCCCAAGCAGACCCCAGTCCAGTACCTGCTCCCCGAGGCCAAGGCCCAGGACTTGGACAAGATCTGCGTAGTCATCGACCTGGACGAGACCCTGGTGCACAGCTCCTTCAAGCCAGTCAACAATGCCGACTTCATCATCCCTGTGGAGATTGATGGGGTGGTCCACCAGGTCTATGTGCTGAAGCGGCCCCACGTCGATGAGTTCCTGCAGCGGATGGGTGAGCTCTTCGAATGCGTGCTGTTCACCGCCAGCCTTGCCAAGTACGCAGACCCAGTAGCTGACCTGCTGGACAAGTGGGGGGCCTTCCGGGCGCGGCTGTTTCGTGAATCATGCGTCTTCCACCGGGGGAACTACGTGAAGGACCTGAGCCGGCTGGGCCGAGACCTTCGGCGGGTGCTCATCCTGGACAACTCGCCCGCCTCCTATGTCTTCCATCCAGATAACGCCGTACCGGTGGCCTCGTGGTTTGACAACATGAGTGACACGGAGCTCCACGACCTCCTGCCCTTCTTCGAGCAGCTCAGCCGTGTGGATGACGTGTACTCAGTGCTCAGGCAGCCTCGGCCCGGCAGCTAG

Related Sequences

bmy_03172T0 SequenceType object (3)

Length: 262 aa      View alignments
>bmy_03172T0
MDSSAVITQISKEEARSPLRSKGDQKSAASQKPRSRGILHSLFCCVCRDDGEALPAHSGAPLLVEENGAVPKQTPVQYLLPEAKAQDLDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQPRPGS*