Part of scaffold_91 (Scaffold)

For more information consult the page for scaffold_91 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMARCAL1 ENSTTRG00000009001 (Bottlenosed dolphin)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008537, Bottlenosed dolphin)

Protein Percentage 84.13%
cDNA percentage 86.03%
Ka/Ks Ratio 0.53479 (Ka = 0.0427, Ks = 0.0798)

SMARCAL1 ENSBTAG00000003843 (Cow)

Gene Details

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005013, Cow)

Protein Percentage 82.44%
cDNA percentage 86.4%
Ka/Ks Ratio 0.45122 (Ka = 0.1188, Ks = 0.2634)

SMARCAL1  (Minke Whale)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1

External Links

Gene match (Identifier: BACU012686, Minke Whale)

Protein Percentage 95.14%
cDNA percentage 95.59%
Ka/Ks Ratio 0.37054 (Ka = 0.0328, Ks = 0.0886)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3051 bp    Location:1995853..1947201   Strand:-
>bmy_03191
ATGTCCTTGCCCCTTACAGAGGAGCAGAGGAAAAAAATTGAAGAGAATCGGCAAAAGGCTCTGGCCCGTAGAGCTGAGAAATTATTAGCAGAACAGCATCAGAACACAGTCTCGGGCTCCAACATTGCTGCCAAACCTTCCCAGTCCAAGCAGGGCCCTTCCAGACACCTCCACCAGGATCCTTCTAAGTCAGGGAGCCATGGTGTCGTTTTCAACCAACAGAATCCCAGGAGTTCATCTGATGGTGATCAGAGACCTCAAAATTCCCACAGTTTTCAACTCAGCACCTCAGAGCAGGCAAAGGGGACATGGCAGAGGCAAGAAGAGATGCCCACAGCCTGCCCGAGCCACCGCCCACCAAATCAAGTGACTCTCGCTGGGATCTCCCCTCCCTTGGCAAACAGTCCTCCAACGGTCTCCAGCGAACAGCTCTGGGGTTATGGGTTAGAGCAAGGTCAGATTCAGGCTTCACACGAGACCAAATCGACACCCTTTGTTAACACAACTCATGAGCCTTTGGCCAGAGCAAAGAATTTCCAGGAGACAGCAGCTTCTTCCTCTGGACAGCCTCCCAGGGATCCTGAATTCGAGGCCAGGATGGCAAGACCCTCCACCTCTGGGCAGAACGTTTCAGGGAGTGTGATGCCCAGGACAGAAGAAAGACTACAACAGAAATCAGGGACCCCACTCCACAAAGCAGCAGGCTCCCAGCAGGGAACATGCATAAAAATCGGTGATCGTTTCCAGGTGAAGATTGGGTACAACGAGGAGCTCATTGCAGTGTTCAAGGGTCTGCCCAGCAGACGTTATGTGAAAGCAGCCCAGCACCTCCAGGCTGTCACTCTGCAGCCTTTGGAAGGGGCCGAGGGCCACGTGGAGTCACCCTCTACCAGCAGCGGCGGCATTGCAACCCAGACCTGCCTTCCTGTAGCTCCCTCCCTTGCCTTTGTCAAAGGGCAGTGCGTACTCATCTCCCGGGCCCGCTTTGAGGCAGACATCAGCTATTCAGAAGACCTGATTGCGCTATGTCAAGACCAGGAAGTGGAACTTTCTCCTGGAAGAGTACACATCTCTCTGCTGTGTGGCCCGGTAGCGTTCTGCCGGAGAGCTGTTGTACAGAAACACTTCTCTGTGACTCATGAAGCCAGACTGCACATTCCTGTCGTCTTCCAGCACAGGGAGGGGATAGCGTATTTGCAATTGCCAATTGATGGTTGTGGCAGAAGACTTTTGGAATACCTGGAAAGGGTGCGCTGCCTTCCACAGGTTCAGCTGGATCCTCTGCCCAAGACTCTCACCCTGGCTTTCGCCGCTCAGCTCCAGAAGACGTCTCTGTGTCCCGTGGCAGACATCCCCGAGGCAGACCTGTCCAGAGTGGATTCTAAGCTCGTGTCTAGCCTGCTGCCCTTTCAGAGAGTTGGAGTCAATTTTGCCATAGCGAAAAGAGGCCGCCTGCTGCTTGCTGATGACATGGGCCTGGGGAAGACCATCCAAGCCATCTGCATAGCCGCCTATTACCGGAAGGAGTGGCCACTCCTGGTGGTGGTACCGTCATCTGTGCGCTTCACCTGGGAGCAGGCCTTCCGTCAGTGGCTGCCGTCTCTGAGCCCAGACCACATCAACGTCGTGGTGACTGGGAAGGACCGCCTGACAGCTGGCTTGGTCAACATTGTCAGTTTTGATCTTCTGAGCAAGTTAGAAAAGCAGCTGAAACCCCCTTTTAGAGTTGTCATCATTGATGAATCTCACTTCCTCAAAAACATTAAGACTGCCCGCTGTCGTACAGCTRTGCCCCTCCTCAAGGTTGCCAAGAGGGTGATCTTACTGTCGGGCACCCCAGCCATGTCCCGGCCGGCAGAGCTCTACACGCAGATCCTCGCCGTCAGGCCGACTTTCTTCCCTCAGTTCCACACCTTTGGACTTCGCTACTGTGGCGCCAAGCGGCTGCCCTGGGGATGGGATTATTCAGGCTCCTCCAACCTGGGGGAGCTGAAGCTCCTGCTGGAGGAGACGGTCATGCTGCGACGCCTCAAGGGCGACGTCCTCTCCCAGCTCCCAGCCAAACAGCGCAAGATGGTGGTGGTCGCCCCAGGCCAGATCAGCGCCAGGACCAGAGCTGCCCTGGATGCCGCGGCCAAGGAGATGACCACCAAGGACAACACTAAACAGCAGCAGAAAGAAGCCCTCATTCTCTTCTTCAACCGAACAGCTGAAGCTAAAATCCCATCTGTCATTGAATATATCCTGGACCTACTGGAAAGTGGAAGAGAGAAGTTTCTAGTGTTTGCACACCATAAGGTGGTTTTGGATGCAGTTACTAATGAGCTTGAGAGGAAGCGTGTGAAGCACATCCGCATCGATGGCTCCACCTCCTCGGCCGACCGCGAGGACCTGTGCCAGCAGTTCCAGCTGTCGGAGGGGCCCGCCGTGGCCGTGCTGTCCATCACCGCCGCCAACATGGGCCTCACCTTCTCCTCGGCTGACCTGGTGGTGTTCGCGGAGCTGTTTTGGAACCCAGGGGTGCTGATGCAGGCTGAGGACCGGGTGCACCGCATCGGGCAGTCGAGCTCCGTGGGCATCCACTACCTGGTGGCGAGAGGCACGGCTGATGACTACCTTTGGCCCCTGATTCAAGAGAAGATTAAAGTTCTGGGTGAAGCCGGGCTTTCTGAGACCAATTTTTCAGAAATGACAGAAGCCGCAGATTATTTCTACAAGGACCCAAAGCAGCGGAAGATCTATGACCTTTTCCAGAAGTCCTTTGAGCAAGATGGAAGCGATATGGAGCTCCTGGAGGCAGCGGAGTCCTTTGACCCAGGAAGTGGTTCCCAGGACACGGGAGACACACTGGATGAAAGCACATTGACAGGCAGTCCACTGAAGAAGAGCAGATTTGAATTTTTTGATAACTGGGACAGCTTTACCTCTCCTCTCCTTTGCTCCTCTGGTCGTTACCACAGTGTTGGTCTCTGTCTCCAAGCCCAGCGGGTTACCAGCCCATGTGTCAGCATTTCCTTTCATTATGTGTGGGTTTGCTTGGGTCTTAATTAA

Related Sequences

bmy_03191T0 Protein

Length: 1017 aa      View alignments
>bmy_03191T0
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQNTVSGSNIAAKPSQSKQGPSRHLHQDPSKSGSHGVVFNQQNPRSSSDGDQRPQNSHSFQLSTSEQAKGTWQRQEEMPTACPSHRPPNQVTLAGISPPLANSPPTVSSEQLWGYGLEQGQIQASHETKSTPFVNTTHEPLARAKNFQETAASSSGQPPRDPEFEARMARPSTSGQNVSGSVMPRTEERLQQKSGTPLHKAAGSQQGTCIKIGDRFQVKIGYNEELIAVFKGLPSRRYVKAAQHLQAVTLQPLEGAEGHVESPSTSSGGIATQTCLPVAPSLAFVKGQCVLISRARFEADISYSEDLIALCQDQEVELSPGRVHISLLCGPVAFCRRAVVQKHFSVTHEARLHIPVVFQHREGIAYLQLPIDGCGRRLLEYLERVRCLPQVQLDPLPKTLTLAFAAQLQKTSLCPVADIPEADLSRVDSKLVSSLLPFQRVGVNFAIAKRGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVVPSSVRFTWEQAFRQWLPSLSPDHINVVVTGKDRLTAGLVNIVSFDLLSKLEKQLKPPFRVVIIDESHFLKNIKTARCRTAXPLLKVAKRVILLSGTPAMSRPAELYTQILAVRPTFFPQFHTFGLRYCGAKRLPWGWDYSGSSNLGELKLLLEETVMLRRLKGDVLSQLPAKQRKMVVVAPGQISARTRAALDAAAKEMTTKDNTKQQQKEALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAVTNELERKRVKHIRIDGSTSSADREDLCQQFQLSEGPAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLMQAEDRVHRIGQSSSVGIHYLVARGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEAADYFYKDPKQRKIYDLFQKSFEQDGSDMELLEAAESFDPGSGSQDTGDTLDESTLTGSPLKKSRFEFFDNWDSFTSPLLCSSGRYHSVGLCLQAQRVTSPCVSISFHYVWVCLGLN*