Part of scaffold_93 (Scaffold)

For more information consult the page for scaffold_93 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HJURP ENSTTRG00000004404 (Bottlenosed dolphin)

Gene Details

Holliday junction recognition protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004146, Bottlenosed dolphin)

Protein Percentage 92.87%
cDNA percentage 95.71%
Ka/Ks Ratio 0.66378 (Ka = 0.038, Ks = 0.0573)

HJURP ENSBTAG00000024726 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040311, Cow)

Protein Percentage 73.52%
cDNA percentage 82.14%
Ka/Ks Ratio 0.48275 (Ka = 0.1637, Ks = 0.339)

HJURP  (Minke Whale)

Gene Details

Holliday junction recognition protein

External Links

Gene match (Identifier: BACU010993, Minke Whale)

Protein Percentage 94.65%
cDNA percentage 96.88%
Ka/Ks Ratio 0.68411 (Ka = 0.0274, Ks = 0.0401)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2376 bp    Location:23100..6114   Strand:-
>bmy_03194
ATGGAGGGCGAGGTCCTGGGAGAGGAGGCGCTGCTGCGGAAGCTCAGGGACAGCCGCCGCCGCTTCCAGAGGCGCATGCAGCAGCTGATAGAGAAGTACAACCAGCCCTTCGAGGACGCCCCGGTGGTGCAGATGTCCACGCTGACCTACGACACGCCCCAGGGATTGCGAATTTGGGGAGGAAGATTAATAAAGGAAAGAAATACAGGACAAATCCAGGGCTCCCCGGTGAAGACGGACGACAGGACAGATGGACCCATGCGAGTCCCAGCTGGAGGTCACGAGCTTCCCTTGCCCTGCACACAAGTTGAGGTGCCCTGGAGCCCAGTGAAAAATGAGCTAAGGAGGAAGTACTTGACACAAGTGGATATCCTGCTGCAGGATGAAGGGTGTTTGGAGTGTGCCAGTTACGGAGAGGGAAAGGACACCCGTGTGACCCTGGTCCCTTCATTGGCCTCGCCCGCCAGGCCTGCCGTAGGATGCTACGGTGGCGTCTCTGAAGAGAGCCCCGGTGGCCCATTTCAGCCAACGTCATTGCCCAGAGAGGGCGATGCTTCGCCCTCTTGCTCAGCAGACCTGGCCCTGGTGCCGAGGGGTGATGGCATCTCCTTACAGGGAGGGACCGGTGGCAGCAGCTTCTCAAGCAGCCGATGCTCTGAGGCCGAGGACATCTGCAACGCGACACTCAGCGATCTGTACGCGGGCATGCTGCACTCCATGAGCTGCCTGCTGGGTGTGAGGCCCTCCTGCGTCATCTCCACCAAGACGTTCATCCGCCAGAACTGGAGCTCCAAGCGGAGGCACAGGTGTAAGAGCAGAATGAACAGAACAAGCTGCAGAGGAGGCGGGCGCTCTCGGAGGAGCCCCCAGGAGAGACGTCCACCCAGCTCCGAACCCGCGAAGGACGTGGCAGTGTTAAGAGATCGCAAGAACTTACTCGATGTTTCTGGCCATAAGATGGGTTTAAAATTGGGAAGGGCTTTTCTGGAAGTAAACAAACCCCAGATCCACGCCTTCGCTTCACATTGGAAGGAGCTTCCGAGAACGCCTCAGAAGCATCATTCTTCATTGACTTACTTAGACTCCAATGCAGTGTATCATCTTGATCAGGAAAATAGATTCATGACATTAAAGTGGTTGATTTCTCCTGTAAAAATAGGTTCTAGACCCAGAGTACCGCCGGGCGAGGGAGGGAATCGTTAYAGGGAGATCGAAATCAGATTTGACAAGCTTCATCAGGAATATTGCTCGAATCTTAGGAAGCAGCCCTGCCTGACTTACCTTTCCGGCTCCTCAGCTGTGGATGTGTACAGAGGTGGTCCAGCAAGCCCTGGTAGCCCCCAGGGCGTAGAAGCCCACAGGCCGAGTAGCCCTCTCCGCAGAGCAAAAGCTAAGAGGTTGAGTGAGGCTTTTGAAAGCCTGGGCGAAAGATCTATCAGAGAAGGTAGCTGCCCACCAAAGAGTGACTCCTTCCCCTCACTTTCAAAGRCCAACTCCACACACAGCCCGGGCCGCTCGGAGCAGACCTCTGACCTTGCTTGTCAAGGAGATGATCTGGGAGGATTTAGGAAGTCAGTATCGCTCAACAAAGCCATTTCAGYACCCAGGGTACAACCTCCAGGCTGTGCCAGGGATCGTTACGATGACATTAAAGAAAAATTTGACAAGCTTCATCAAAAGTATTGCCAAAAATCGCTTCAGCAGACGCAGGCGCCTTCGTGTACCAGAGCATCTCCAGATAAAGCAAGTGTGGGAGTTCGGTATCAAAAAGAAGACTTCTTAGGAAAATTCGATCCAGACTCTGGCTCCCAGGGCCCCGCAAAGTTGTCATCATCACCCCAGCAGAGCATTAAAAGTCCCCTCGGCTCAAACACAATTGGGGCCCCTCCATCTACAGGTTTTGCTCTCCATGCCGGCTGGGGCCATCAAGTCCCCACAAAACGACGCCGATTATCAGACCCTCAGGTGTGCAGACAGTGGGCTGGACCCTGGGATTTCTCAGCTGTGGGCAGAGCCATCCCGAGGCCCGGGGAAGAGGCTGGCTCTTTACAGCACACCTGGGAAGAGAAGAAGGTGCGTTTCTCCTCTTCACCTCACACTCAAAACATAGCTGTTGCAGGCAAAACTGATCTAGAATTGACAACTCTGACCCCTTCTGGATCCCTCCTGGGGACAGAGCAGGAGTCAGCCCTTGGAGAACCCCCAGCAGCATCCCACACATGTGAGGGGCCGGACCACACGCTCCTGCTCGGCCCACGAGGAAAGAACAACACATCTTTCAGGATGGAAGAGAAAAGTGATTTCGTGTTAGAAAACCTCAAAGCTGAAAATCTATCGCCAAGTTATTCTGAATTGTACAGACAGTTTCTCATCTAG

Related Sequences

bmy_03194T0 Protein

Length: 792 aa      View alignments
>bmy_03194T0
MEGEVLGEEALLRKLRDSRRRFQRRMQQLIEKYNQPFEDAPVVQMSTLTYDTPQGLRIWGGRLIKERNTGQIQGSPVKTDDRTDGPMRVPAGGHELPLPCTQVEVPWSPVKNELRRKYLTQVDILLQDEGCLECASYGEGKDTRVTLVPSLASPARPAVGCYGGVSEESPGGPFQPTSLPREGDASPSCSADLALVPRGDGISLQGGTGGSSFSSSRCSEAEDICNATLSDLYAGMLHSMSCLLGVRPSCVISTKTFIRQNWSSKRRHRCKSRMNRTSCRGGGRSRRSPQERRPPSSEPAKDVAVLRDRKNLLDVSGHKMGLKLGRAFLEVNKPQIHAFASHWKELPRTPQKHHSSLTYLDSNAVYHLDQENRFMTLKWLISPVKIGSRPRVPPGEGGNRYREIEIRFDKLHQEYCSNLRKQPCLTYLSGSSAVDVYRGGPASPGSPQGVEAHRPSSPLRRAKAKRLSEAFESLGERSIREGSCPPKSDSFPSLSKXNSTHSPGRSEQTSDLACQGDDLGGFRKSVSLNKAISXPRVQPPGCARDRYDDIKEKFDKLHQKYCQKSLQQTQAPSCTRASPDKASVGVRYQKEDFLGKFDPDSGSQGPAKLSSSPQQSIKSPLGSNTIGAPPSTGFALHAGWGHQVPTKRRRLSDPQVCRQWAGPWDFSAVGRAIPRPGEEAGSLQHTWEEKKVRFSSSPHTQNIAVAGKTDLELTTLTPSGSLLGTEQESALGEPPAASHTCEGPDHTLLLGPRGKNNTSFRMEEKSDFVLENLKAENLSPSYSELYRQFLI*