Sequence detailsbmy_03196 (Coding sequence)

Part of scaffold_93 (SequenceType object (1))

For more information consult the page for scaffold_93 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPP2ENSBTAG00000002030 (Cow)

Gene Details

Secreted phosphoprotein 24

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002631, Cow)

Protein Percentage 72.5%
cDNA percentage 81.88%
Ka/Ks Ratio 0.52819 (Ka = 0.1767, Ks = 0.3346)

SPP2 (Minke Whale)

Gene Details

secreted phosphoprotein 2, 24kDa

External Links

Gene match (Identifier: BACU010995, Minke Whale)

Protein Percentage 88.27%
cDNA percentage 90.95%
Ka/Ks Ratio 0.44068 (Ka = 0.0763, Ks = 0.173)

Additional orthologs identified in other species via the OPTIC pipeline.

SPP2 (Human)   Spp2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 489 bp    Location:176406..200668   Strand:+
Raw sequence 
>bmy_03196
ATGGAGAAGATGGTGATGAAGGTGTCGATTATATTTGTCCTTGGAACGAACTACTGGTTCCACTACTGTGCAGGTTTTCCCGTGTATGACTATGACCCGTCTTCCTTGAGGGAAGCTGTCAGCGCCTCTGTGGCAAAAGTGAATTCCCAGTCGCTGAGCCCCTATCTGTTTCGGGCGTTCAGAAGCTCAATTAGAAGAGTCAACATCTTGGACGAGGACAGCTTGACCATGGACATAGAGTTCGGCATCCGAGAGACGACGTGCAGGAGGGGTTCTAGGGAAGACCCCRCCACCTGTGACTTCCAGAGGGGCTACTACGCKCCGGCGGCTGTTTGCAGAAGCACCGTGCGGGTGTCTGCTGAGCAGGTGCAGGACGTGTGGGTTCGCTGCCACTGGTCCTCCAGCTCCGAGTCTAACAGCAGTGAAGAGCAAAATGCATTGGAAGGAATAGACGGTCCAATGAAGAAAGATACTTTACAAATTGTGTGA

Related Sequences

bmy_03196T0 SequenceType object (3)

Length: 163 aa      View alignments
>bmy_03196T0
MEKMVMKVSIIFVLGTNYWFHYCAGFPVYDYDPSSLREAVSASVAKVNSQSLSPYLFRAFRSSIRRVNILDEDSLTMDIEFGIRETTCRRGSREDPXTCDFQRGYYAPAAVCRSTVRVSAEQVQDVWVRCHWSSSSESNSSEEQNALEGIDGPMKKDTLQIV*