Sequence detailsbmy_03238 (Coding sequence)

Part of scaffold_94 (SequenceType object (1))

For more information consult the page for scaffold_94 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MCAMENSTTRG00000005434 (Bottlenosed dolphin)

Gene Details

melanoma cell adhesion molecule

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005127, Bottlenosed dolphin)

Protein Percentage 97.72%
cDNA percentage 97.72%
Ka/Ks Ratio 0.15067 (Ka = 0.0107, Ks = 0.0713)

MCAMENSBTAG00000006835 (Cow)

Gene Details

cell surface glycoprotein MUC18 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000044248, Cow)

Protein Percentage 89.32%
cDNA percentage 91.89%
Ka/Ks Ratio 0.21341 (Ka = 0.0517, Ks = 0.2423)

Additional orthologs identified in other species via the OPTIC pipeline.

MCAM (Human)   Mcam (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1917 bp    Location:64553..72468   Strand:+
Raw sequence 
>bmy_03238
ATGGGACGGTCCGGGCTCATCTGCGCCTTCCTGATCGCCGCCTGCTGCTGCTGTCGCCGCGCCGCGGGTGTGCCTGGAGAGGCTGAGCGGCCCCAGCCGGAGCTGGTGGAGGTGGAAGTGGGCGGCACGGCCCTTCTGAAATGTGGCCCCTCCCACTCCCAGGGCAACTTCAGCCACGCGGACTGGTTTTCTGTCCACAAGGAGAAGCCAACACTCATCTTCCGTGTGAGTCAGGGCCAGGGCCAGAGCGAACCTGGGGAATACCAGAATCGGCTCAGCCTCCAGGACAAAGGGACTACTCTGGCCCTAACAGGCATCACCCCCCACGACGAGCGCATCTTCCTGTGCCAGGGCAAGCGCCCTCGGTCCCAGGGCCACCGCATCCAGCTCCGTGTCTACAAAGCTCCGGAGGAGCCAATCATCCAGGTCAATGCCTTGGGCATTTCTGTGAACAGTGAGGAGCCTGAGGAGGTCGCCACCTGTGTGGGGAGGAATGGGTACCCCCTTCCTCAAGTCACCTGGTACAAGAACAGCCAGTCCCTGAAGGAGGAGAAGAACCGGGTCCACATCCAGTCATCCCAGATCGTGGAGTCGAGTGGTCTGTACACCTTGAGGAGCGTTCTGAAGGCACAGCTGACCAAGGAGGACAAAGATGCCCAGTTTTACTGCGAGCTCAGCTATCGGCTGCCCAGTGGGAACCACATGAAGGAATCTAGGGAGGTCACTGTCCCTGTTTTCTACCCGGCAGAGAGAGTGTGGCTGGAAGTGGAGCCTGAGGGGATGCTGAAGGAGGGGGACCGCGTGGAAATCAGGTGTTTGGCTGATGGCAACCCTCCGCCCCACTTCAGCATCAGCAAGCAGAACCTCAGCACCAGGGAGATGGAGGAAGAGAGGACCGATGACAATGGGGTCCTGGTCTTGGAGCCCGCCCAGAAGGAGCATAGCGGCCTCTACGAATGTCAGGGCCTGGACTTGGAAACCACGGCATCGCTGCTGAGCGACCAACAGGAGCTGGTGGTGAACTATGTGTCTGAAGTCCGGGTGAGCCCCGCAGCCCCCGAGAGCCAGGAGGGCAGCAGCCTCACCCTGACCTGTGAGGCAGAGAGTAACCAGGACCTTGAGTTCCAGTGGCTGAGAGAAAAGACAGGCAAGGTGTTGGCAAAGGGGCCTGTGCTCCATTTACGCAACCTGAAACGGGAGGCAGGGGGAGGCTACCGCTGCGTGGCATCTGTGCCCAGCGTTCCCGGCCTGAACCGCACCCAGCTCGTCAACGTGGCCATTTTCGGGTCCCCGTGGATGGCGCTAAGGGAGAGGAAGATGTGGGTGAAGGAGAACTCAGTGCTGAATCTGTCCTGTGAAGCATCAGGGCATCCTCGGCCCAGCATCGTCTGGAGCGTCGATGGCACGGCCAGTGAACAGGACCAAGATCCGCAGAGTGTCCTGAGCGTCCTGAATGTCCTTGTGACCCCAGAGCTGTTGGAGACAGGCGCTGAGTGCGTGGCCTCCAACTCCCTGGGCAGAAACACCACTGTCATTATCCTGGAGCTGGACTCCAACAGAACCACTAGCCTCAGCACCTCCACCGTCAGTCCCTATGCCAGAGCCAACAGCACCTCCACAGAGAAAAAGCTGACAGAGCCCGAAAGCAAGGGTGTGGTCATCGTGGCCGTGACCGTGTGTGTCCTGGTCCTGGCTGTGCTGGGCGCTGTCCTCTATTTCTTCTACAAGAAGGGCAAGCTGCCGTGCGGACGGTCAGGCAAACAAGAGATCACGCTGCCCCCGTCTCGTAAGGGCGAATTTGTAGTTGAAGTTAAGTCAGATAAGCTCCCAGAAGAGATGGGCCTCCTTCAGGGCAGCAACGGTGACAAGAGGGCTCCAGGAGACCAGGGAGAGAAATACATCGATCTGAGGCACTAG

Related Sequences

bmy_03238T0 SequenceType object (3)

Length: 639 aa      View alignments
>bmy_03238T0
MGRSGLICAFLIAACCCCRRAAGVPGEAERPQPELVEVEVGGTALLKCGPSHSQGNFSHADWFSVHKEKPTLIFRVSQGQGQSEPGEYQNRLSLQDKGTTLALTGITPHDERIFLCQGKRPRSQGHRIQLRVYKAPEEPIIQVNALGISVNSEEPEEVATCVGRNGYPLPQVTWYKNSQSLKEEKNRVHIQSSQIVESSGLYTLRSVLKAQLTKEDKDAQFYCELSYRLPSGNHMKESREVTVPVFYPAERVWLEVEPEGMLKEGDRVEIRCLADGNPPPHFSISKQNLSTREMEEERTDDNGVLVLEPAQKEHSGLYECQGLDLETTASLLSDQQELVVNYVSEVRVSPAAPESQEGSSLTLTCEAESNQDLEFQWLREKTGKVLAKGPVLHLRNLKREAGGGYRCVASVPSVPGLNRTQLVNVAIFGSPWMALRERKMWVKENSVLNLSCEASGHPRPSIVWSVDGTASEQDQDPQSVLSVLNVLVTPELLETGAECVASNSLGRNTTVIILELDSNRTTSLSTSTVSPYARANSTSTEKKLTEPESKGVVIVAVTVCVLVLAVLGAVLYFFYKKGKLPCGRSGKQEITLPPSRKGEFVVEVKSDKLPEEMGLLQGSNGDKRAPGDQGEKYIDLRH*