Sequence detailsbmy_03247 (Coding sequence)

Part of scaffold_94 (SequenceType object (1))

For more information consult the page for scaffold_94 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C2CD2LENSTTRG00000002808 (Bottlenosed dolphin)

Gene Details

C2CD2-like

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002632, Bottlenosed dolphin)

Protein Percentage 86.89%
cDNA percentage 87.28%
Ka/Ks Ratio 0.28213 (Ka = 0.0134, Ks = 0.0475)

C2CD2LENSBTAG00000015013 (Cow)

Gene Details

C2 domain-containing protein 2-like

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019988, Cow)

Protein Percentage 94.97%
cDNA percentage 94.8%
Ka/Ks Ratio 0.18026 (Ka = 0.0255, Ks = 0.1415)

C2CD2L (Minke Whale)

Gene Details

C2CD2-like

External Links

Gene match (Identifier: BACU017339, Minke Whale)

Protein Percentage 98.49%
cDNA percentage 98.88%
Ka/Ks Ratio 0.37358 (Ka = 0.0081, Ks = 0.0216)

Additional orthologs identified in other species via the OPTIC pipeline.

C2CD2L (Human)   C2cd2l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1881 bp    Location:238757..232321   Strand:-
Raw sequence 
>bmy_03247
ATGCCCACATTACTCCCTCAGAGCTCCATCCAAATCGCCTTTGAGGAGGTGCCCCAACTCCCACCCAAAGCCAGCATCAGTCATGTGACCTGCACAGACCAATCAGAGCGCACCATGGTGCTGCATTGCCAGCTCTCTGCTGAGGAGGTGATGTTTCCAGTCTCTGTGACCCAGCAGTCCCCCGCTGCCGTCTCCATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGTTGGAAGTCAACCTGGAGGAAATCCCTGGCGAGGGCCTGCTTGTATCCTGGGCCTTCACTGATCGCCCAGATCTCAGGCTGACAGTGCTTCCCAAGCTGCAGAACAGGGAGAGAGGTGAGGAGCAAGTAGAGCTCTCCACTATTGAGGAGCTGATCGAGGATTCCATAGTCAGCACCCAGCCAGCTATGATGGTCAACCTCAGGGCTTGCTCTGCCCCTGGCGGCCTGGTACCCAGTGAGAAGCCACCTGTGGTGCCCCAAGCCCAGCCAGCCATCCCCAGACCTACCCGGTTATTCCTAAGGCAGCTTCGAGCATCTCACCTGGGATGTGAGCTGGAAGGCACTGGGGAAGTGTGCTGTGTCGCTGAGCTCGACAACCCCATGCAACAGAAGTGGACCAAGCCCATGAGGGCTGGGCCTGAGGTGGAGTGGAGCGAGGACCTGACGCTGGATCTGGGGCCCCAGAGCCGGGAGCTGATCCTCAAAGTGCTGAGGAGTAGCAGCTGTGGAGACAGTGAGTATGGGGCAGGAAGGAGCACCTCTGGGTGGGTGCTGAGCGGGGCCTGGTCATGGCCCCAGCTCACAGTGCCACCCCTTTCCCCAGCTGAATTCTTGGGCCAGGCCACAGTGTCTGTGGCCTCCCCTTCCAGACCACTGTCCCGAAGACAGGTGTGCCCACTCACCCCTGGGCCAGGGAAAGCCCTGGGGCAGGCAGCCACCATGGCAGTAGAGCTTCAGTATGAGGAGGGCTCCCCCCGGAACCTGGGCACTCCCACCCCCTCCACTCCACGCCCCAGCATCACACCTACCAAGAAGATTGAGCTTGACCGGACCATCATGCCCGATGGCACCATTGTCACCACAGTCACCACCGTCCAGTCCCGGCCCCGGGTAGATGGCAAATTAGACTCCCCCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGAGAAGACAACAACTGTGCTGAGCGAGAGCGGTGGCCCCAGCAGTACCTCCCACAGCAGCAGCCCAGGGGAGAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCCATTCGCCAGCTGACTGAGCCCAGCGGGCGGGCAGCCAAGAAGACACCCACCAAGCGTAGCACACTCATCATCTCCGGTGTTTCCAAGGTGCCCATTGCTCAGGACGAGTTGGCACTATCCCTGGGCTATGCGGCATCCCTGGAAGCCTCAATGCAGGATGATGCAGGGCCCAGTGGAGGTCCCTCTTCACCTCCCTCAGACCCACCAGCCATGTCCCCAGGACCCCTAGATGCCCTCTCCAGTCCCACGAGTGTCCAGGAAGCAGATGAGACAACACGTTCGGACATTTCTGAGAGGCCCTCTGTGGATGATGTTGAGTCGGAAACAGGGTCTACTGGTGCGCTGGAAACCCGCAGCCTCAAGGATCACAAAGTGAGCTTCCTGCGCAGTGGCACTAAGCTCATCTTCCGCCGGAGGCCTCGTCAGAAGGAAGCTGGTCTGAGCCAATCACACGATGACCTCTCCAACACGACGGCCACACCCAGCGTCCGAAAGAAGGCTGGCAGCTTTTCTCGCCGTCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGCAACCCCAGCCCCCAGCTCTGA

Related Sequences

bmy_03247T0 SequenceType object (3)

Length: 627 aa      View alignments
>bmy_03247T0
MPTLLPQSSIQIAFEEVPQLPPKASISHVTCTDQSERTMVLHCQLSAEEVMFPVSVTQQSPAAVSMETYHVTLTLPPTQLEVNLEEIPGEGLLVSWAFTDRPDLRLTVLPKLQNRERGEEQVELSTIEELIEDSIVSTQPAMMVNLRACSAPGGLVPSEKPPVVPQAQPAIPRPTRLFLRQLRASHLGCELEGTGEVCCVAELDNPMQQKWTKPMRAGPEVEWSEDLTLDLGPQSRELILKVLRSSSCGDSEYGAGRSTSGWVLSGAWSWPQLTVPPLSPAEFLGQATVSVASPSRPLSRRQVCPLTPGPGKALGQAATMAVELQYEEGSPRNLGTPTPSTPRPSITPTKKIELDRTIMPDGTIVTTVTTVQSRPRVDGKLDSPSRSPSKVEVTEKTTTVLSESGGPSSTSHSSSPGESHLSNGLDPVAETAIRQLTEPSGRAAKKTPTKRSTLIISGVSKVPIAQDELALSLGYAASLEASMQDDAGPSGGPSSPPSDPPAMSPGPLDALSSPTSVQEADETTRSDISERPSVDDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRPRQKEAGLSQSHDDLSNTTATPSVRKKAGSFSRRLIKRFSFKSKPKANGNPSPQL*