Sequence detailsbmy_03251 (Coding sequence)

Part of scaffold_94 (SequenceType object (1))

For more information consult the page for scaffold_94 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS11ENSTTRG00000002804 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 11 homolog (S. cerevisiae)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002628, Bottlenosed dolphin)

Protein Percentage 93.28%
cDNA percentage 92.71%
Ka/Ks Ratio 0.07066 (Ka = 0.0028, Ks = 0.0396)

VPS11ENSBTAG00000005357 (Cow)

Gene Details

vacuolar protein sorting-associated protein 11 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007042, Cow)

Protein Percentage 98.97%
cDNA percentage 95.67%
Ka/Ks Ratio 0.0232 (Ka = 0.0046, Ks = 0.1982)

VPS11 (Minke Whale)

Gene Details

vacuolar protein sorting 11 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU017335, Minke Whale)

Protein Percentage 98.86%
cDNA percentage 98.48%
Ka/Ks Ratio 0.12282 (Ka = 0.0069, Ks = 0.0559)

Additional orthologs identified in other species via the OPTIC pipeline.

Vps11 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2637 bp    Location:271246..261819   Strand:-
Raw sequence 
>bmy_03251
ATGGAAGGCCAGATCTGGTTCTTGCCCCGCTCCCTACAGCTTACCGGGTTCCAGGCCTACAAACTACGGGTGACACACCTGTACCAGTTGAAGCAGCACAACATTCTGGCATCTGTTGGTGAGGATGAAGAGGGGATCAACCCCCTGGTAAAGATCTGGAACCTGGAGAAGAGAGATGGTGGCAATCCACTCTGCACTCGAATCTTCCCTGCCATCCCAGGGGCAGAGCCGACTGTTGTATCTTGTTTGACTGTCCATGAAAATCTCAACTTTATGGCCATCGGTTTCACAGATGGCAGTGTTACATTGAACAAAGGGGACATCACTCGGGACCGGCATAGCAAGACCCAGATTTTGCACAAGGGCAACTATCCTGTTACCGGACTGGCCTTTCGCCAAGCAGGAAAGACCACTCACTTGTTTGTTGTGACAACTGAGAATGTTCAGTCCTACATAGTTTCTGGAAAGGACTACCCTCGTGTGGAGTTGGACACCCACGGTTGTGGCCTGCGCTGCTCAGCCCTAAGCGACCCTTCTCAGGACCTGCAGTTCATAGTGGCGGGGGATGAATGTGTCTACTTGTACCAGCCTGATGAACGGGGGCCCTGCTTCGCCTTTGAGGGCCATAAACTCATTGCTCACTGGTTTAGAGGCTACCTTGTCATTGTCTCCCGTGACCGGAAGGTTTCTCCCAAGTCAGAGTTTACCAGCAGGGACTCCCAGAGCTCCGACAAGCAGATTCTCAACATCTATGACCTGTGCAACAAGTTCATAGCCTATAGCACCGTCTTTGAGGATGTAGTGGATGTGCTTGCTGAGTGGGGCTCCCTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCACTGCAGGAGAAGGACACACAGACCAAACTGGAGATGCTGTTTAAGAAGAACCTATTCGAGATGGCGATTAATCTGGCCAAGAGCCAGCATCTGGACAGTGATGGGTTGGCCCAGATCTTCATGCAGTATGGGGACCATCTCTACAGCAAGGGCAACCATGATGGGGCTGTCCAGCAGTATATCCGAACCATTGGAAAGTTGGAGCCGTCGTATGTGATCCGCAAGTTCCTGGATGCCCAGCGCATCCACAACCTGACGGCTTACCTGCAGACCCTGCACCGGCAGTCCCTGGCCAATGCCGACCACACCACCCTACTGCTGAACTGCTACACAAAGCTCAAGGACAGCTCGAAGCTGGAGGAATTCATCAAGACAAAGAGTGAGAGTGAAGTCCACTTTGATGTGGAGACAGCCATCAAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTATTTGGCTGAGAACCACGCACATCACGAGTGGTACTTGAAGATCCAGCTAGAGGACATCAAGAATTATCAGGAAGCCCTTCGATACATCGGCAAGCTGCCTTTTGAGCAGGCAGAGAGCAACATGAAACGCTACGGCAAGATCCTCATGCACCATATACCAGAGCAGACGACCGAGTTGCTGAAGGGACTTTGTACCGACTATCGGCCCAACCTTGAAGGCCGAGGCGATAGGGAGGCTCCAGGCTGCAGGGCCAACTCAGAGGAGTTCATCCCCATCTTTGCCAACAACCCGCGGGAGCTGAAAGCTTTCCTAGAGCATATGAGTGAGGTGCAGCCTGACTCCCCGCAGGGCATCTATGACACACTCCTTGAGCTGCGACTCCAGAACTGGGCTCACGAGGAGGAGCCGCAGGTCAAAGAGAAGCTTCACGCAGAGGCCATCTCCCTACTGAAGAGTGGTCGCTTCTGTGATGTCTTTGACAAGGCCCTGGTCCTCTGCCAGATGCACGACTTCCAGGATGGGGTCCTTTACCTCTATGAGCAGGGGAAACTGTTCCAACAGATCATGCACTATCACATGCAGCACGAGCAGTACCGGCAGGTGATCACCGTGTGCGAGCGCCACGGGGAGCAGGAGCCCTCCCTGTGGGAACAGGCACTCAGCTACTTCGCCCGCAAGGAGGAGGACTGCAAGGAGTACGTGGCGGCCGTGCTTAAGCACATCGAGAGCAAGAACCTCATGCCGCCTCTTCTAGTGGTGCAGACCCTGGCCCACAACTCCACGGCCACCCTGTCTGTCATCCGGGACTACCTGGTCCAAAAACTGCAGAAGCAGAGCCAGCAGATCGCGCAGGACGAGCTCCGAGTGCGGCGCTACCGAGAGGAGACCACCCGTATCCGCCAGGAGATCCAGGAGCTGAAGGCGAGTCCGAAGATTTTCCAGAAGACCAAGTGCAGCATCTGTAACAGTGCCTTGGAGTTGCCCTCAGTCCACTTTCTCTGCGGCCACTCCTTCCACCAGCACTGCTTTGAGAGTTACTCAGAAAGTGATGCCGACTGCCCCACCTGCCTCCCTGAAAACCGCAAGGTCATGGATATGATTCGGGCCCAGGAACAGAAGCGAGATCTCCATGATCAGTTCCAGCACCAGCTCAAGTGCTCCAACGACAGCTTCTCTGTGATTGCTGACTACTTTGGCCGAGGTGTTTTCAACAAATTGACTCTGCTGACCGACCCGCCCACAGCCCGACTGACTGCGAGCCTGGAGGCCGGGCTGCAGAGGGACTTGCTCATACACGCCAGGAGGGGCACTTAA

Related Sequences

bmy_03251T0 SequenceType object (3)

Length: 879 aa      View alignments
>bmy_03251T0
MEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEKRDGGNPLCTRIFPAIPGAEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSDPSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTSRDSQSSDKQILNIYDLCNKFIAYSTVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTKLEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSESEVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQAESNMKRYGKILMHHIPEQTTELLKGLCTDYRPNLEGRGDREAPGCRANSEEFIPIFANNPRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEEEPQVKEKLHAEAISLLKSGRFCDVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVITVCERHGEQEPSLWEQALSYFARKEEDCKEYVAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQKQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIADYFGRGVFNKLTLLTDPPTARLTASLEAGLQRDLLIHARRGT*