Sequence detailsbmy_03267 (Coding sequence)

Part of scaffold_94 (SequenceType object (1))

For more information consult the page for scaffold_94 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFT46ENSTTRG00000004305 (Bottlenosed dolphin)

Gene Details

intraflagellar transport 46 homolog (Chlamydomonas)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004050, Bottlenosed dolphin)

Protein Percentage 95.01%
cDNA percentage 95.8%
Ka/Ks Ratio 0.36111 (Ka = 0.0314, Ks = 0.0868)

IFT46ENSBTAG00000012941 (Cow)

Gene Details

Intraflagellar transport protein 46 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017195, Cow)

Protein Percentage 96.68%
cDNA percentage 94.35%
Ka/Ks Ratio 0.08301 (Ka = 0.0158, Ks = 0.1902)

IFT46 (Minke Whale)

Gene Details

intraflagellar transport 46 homolog (Chlamydomonas)

External Links

Gene match (Identifier: BACU018876, Minke Whale)

Protein Percentage 95.61%
cDNA percentage 96.59%
Ka/Ks Ratio 0.42899 (Ka = 0.0267, Ks = 0.0622)

Additional orthologs identified in other species via the OPTIC pipeline.

IFT46 (Human)   Ift46 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1029 bp    Location:664189..677428   Strand:+
Raw sequence 
>bmy_03267
ATGGCTGACAACAGCAGTGATGAGTACGAAGAGGAAAATAACAAGGTCCTAAGTGAGGGCATGCCACAGGCTCCAGGCCCTAGAGTCAAAGACATGGACCCTGTCCCAACTGCCCCGGCAAGCCCAAGCACCACCTCACCCCTTCTCGTCGGCTTGAGGGAGAAAAAGAAGACCTCGCAGCTCACGCCTCAGCGGGGCTTTAGTGAAAACGATGATGATGACGACGATGATGACTCATCTGAAACTGATTCTGATGATGACGACGATGATGATGAAGAGCATGGGGCCCCTCTGGAAGGGGCCTATGATCCTGCAGATTATGAGCATTTGCCAGTTTCTCCTGAGATTAAGGAACTCTTCCAGTACATCAGTAGGTATACACCTCAGTTGATTGACCTGGACCACAAACTGAAACCTTTCATTCCTGATTTTATCCCAGCTGTCGGGGATATTGATGCATTCTTAAAGGTTCCACGTCCTGATGGAAAGCCTGACAGCCTTGGCCTACTGGTACTGGATGAGCCTTCTACAAAGCAGTCGGACCCTACAGTGCTCTCACTTTGGTTAACAGAGAATTCCAAACAGCACAACGTCACACAACATATGAAAGTAAAGAGCCTGGAAGATGCAGAAAAGAATCCCAAAGCCATTGACACATGGATTGAGAGCATCTCTGAATTACACCGTTCCAAGCCCCCTGCGACTGTGCACTACACCAGGCCTATGCCCGATATTGACATGCTGATGCAGGAATGGTCTCCAGAGTTTGAAGAGCTTTTGGGAAAGGTGAGCCTGCCCACAGCAGAGATTGATTGCAGCCTGGCAGAGTACATAGACATGATCTGTGCCGTCCTAGACATCCCCGTCTACAAGAGTCGGATTCAGTCCCTCCACCTGCTCTTTTCCCTCTACTCGGAATTCAAGAACTCACAGCATTTTAAAGCTCTAGCTGAAGGCAAGAAAGCATTCACCCCTCCATCCAACTCCACCTCCCAAGCAGGAGATGCAGAGACATTAACCTTCAGCTGA

Related Sequences

bmy_03267T0 SequenceType object (3)

Length: 343 aa      View alignments
>bmy_03267T0
MADNSSDEYEEENNKVLSEGMPQAPGPRVKDMDPVPTAPASPSTTSPLLVGLREKKKTSQLTPQRGFSENDDDDDDDDSSETDSDDDDDDDEEHGAPLEGAYDPADYEHLPVSPEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGKPDSLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNVTQHMKVKSLEDAEKNPKAIDTWIESISELHRSKPPATVHYTRPMPDIDMLMQEWSPEFEELLGKVSLPTAEIDCSLAEYIDMICAVLDIPVYKSRIQSLHLLFSLYSEFKNSQHFKALAEGKKAFTPPSNSTSQAGDAETLTFS*