Sequence detailsbmy_03288 (Coding sequence)

Part of scaffold_94 (SequenceType object (1))

For more information consult the page for scaffold_94 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BACE1ENSTTRG00000000978 (Bottlenosed dolphin)

Gene Details

beta-site APP-cleaving enzyme 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000922, Bottlenosed dolphin)

Protein Percentage 99.5%
cDNA percentage 98.66%
Ka/Ks Ratio 0.03737 (Ka = 0.0022, Ks = 0.0582)

BACE1ENSBTAG00000019365 (Cow)

Gene Details

Beta-secretase 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000039837, Cow)

Protein Percentage 99.24%
cDNA percentage 94.96%
Ka/Ks Ratio 0.01093 (Ka = 0.0032, Ks = 0.2924)

BACE1 (Minke Whale)

Gene Details

beta-site APP-cleaving enzyme 1

External Links

Gene match (Identifier: BACU018427, Minke Whale)

Protein Percentage 99.5%
cDNA percentage 99.08%
Ka/Ks Ratio 0.05426 (Ka = 0.0021, Ks = 0.0393)

Additional orthologs identified in other species via the OPTIC pipeline.

BACE1 (Human)   Bace1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1194 bp    Location:1797192..1803443   Strand:+
Raw sequence 
>bmy_03288
ATGAAGGGACTCAACATCCTGGTGGACACAGGCAGCAGTAACTTCGCAGTGGGGGCCGCCCCCCACCCTTTCCTGCACCGCTACTACCAGAGGCAGCTGTCCAGTACATACCGGGACCTCCGGAAGGGCGTGTATGTGCCCTACACCCAGGGCAAGTGGGAGGGGGAGCTGGGCACCGACCTGGTGAGCATCCCCCACGGCCCCAACGTCACCGTGCGTGCCAACATCGCTGCCATCACTGAATCAGACAAGTTCTTCATCAATGGCTCCAACTGGGAGGGCATCCTGGGGCTGGCCTACGCTGAGATCGCCAGGCCTGACGACTCCCTGGAGCCATTCTTCGACTCGTTGGTAAAGCAGACCCACGTGCCCAATCTCTTCTCCCTGCAGCTCTGTGGTGCTGGCTTCCCCCTCAACCAGTCGGAAGTGCTGGCCTCAGTTGGAGGGAGCATGATCATCGGGGGTATCGACCACTCGCTGTACATGGGCAGCCTCTGGTACACACCCATCCGGCGGGAATGGTATTATGAGGTGATCATTGTGCGGGTGGAGATCAATGGACAGGATCTGAAAATGGACTGCAAGGAGTACAACTATGACAAGAGCATCGTTGACAGCGGCACCACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAGCTGCTGTCAAATCCATCAAGGCAGCCTCCTCGACGGAGAAGTTCCCAGACGGTTTCTGGCTCGGGGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCCGTGGAACATTTTCCCGGTCATCTCACTCTACCTAATGGGTGAGGTCACCAATCAGTCCTTCCGAATCACCATCCTTCCACAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACTGTTACAAGTTCGCCATCTCACAGTCATCTACGGGCACTGTCATGGGAGCTGTTATCATGGAGGGCTTCTACGTTGTCTTTGATCGGGCCCGGAAACGAATTGGCTTTGCTGTCAGCGCTTGCCATGACTGTGGCTACAACATCCCACAGACAGATGAATCGACCCTCATGACCATAGCCTATGTCATGGCTGCCATCTGCGCCCTCTTCATGCTGCCCCTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCATCAGCATGATGACTTTGCTGATGACATCTCCCTGCTGAAGTGA

Related Sequences

bmy_03288T0 SequenceType object (3)

Length: 398 aa      View alignments
>bmy_03288T0
MKGLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYMGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHDCGYNIPQTDESTLMTIAYVMAAICALFMLPLCLMVCQWRCLRCLRHQHDDFADDISLLK*