Part of scaffold_94 (SequenceType object (1))

For more information consult the page for scaffold_94 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAFAH1B2ENSTTRG00000000972 (Bottlenosed dolphin)

Gene Details

platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000916, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.27%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0199)

PAFAH1B2ENSBTAG00000005627 (Cow)

Gene Details

Platelet-activating factor acetylhydrolase IB subunit beta

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007398, Cow)

Protein Percentage 100.0%
cDNA percentage 97.23%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0932)

PAFAH1B2 (Minke Whale)

Gene Details

platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)

External Links

Gene match (Identifier: BACU017299, Minke Whale)

Protein Percentage 99.56%
cDNA percentage 99.13%
Ka/Ks Ratio 0.09036 (Ka = 0.0022, Ks = 0.0239)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 897 bp    Location:1934938..1911950   Strand:-
>bmy_03294
ATGGCGTCAGTGCGAGGTCACAGCACATTGTCCCGAATGCCATCTCCACACTACGGGGAACCGGAAGTGGGGGTGCTGCAGCGGGTGCTGAGGCTGGAGGAGGGACGCGCCGGAGCGGGGCCGCCGGGACTGAGCGAGCGACAGACGCGCGACCCGCCGACGCCGCAGCCGCTTGGGGCCCGCACGGACCCTGTGCCTGAGTGTAGAATGAGCCAAGGAGACTCAAACCCAGCAGCCATTCCACATGCAGCGGAAGATATTCAAGGAGATGACAGATGGATGTCTCAGCACAACAGATTTGTCCTGGACTGCAAAGACAAAGAGCCGGATGTCCTGTTCGTGGGGGACTCCATGGTGCAGTTGATGCAGCAGTATGAGATATGGCGAGAGCTTTTTTCCCCACTTCATGCACTGAATTTTGGAATTGGGGGAGATACAACAAGACATGTTTTATGGAGACTAAAGAATGGAGAACTGGAGAATATTAAACCTAAGGTCATTGTTGTCTGGGTAGGAACAAACAACCATGAAAATACAGCAGAGGAAGTAGCAGGTGGAATCGAGGCCATCGTACAACTTATCAACACAAGGCAGCCACAGGCCAAAATCATTGTATTGGGTTTGTTACCTCGAGGTGAGAAGCCCAACCCTTTGAGGCAAAAGAATGCCAAGGTGAACCAGCTCCTCAAGGTTTCCCTGCCGAAACTTGCCAATGTTCAGCTCCTGGATACAGATGGGGGCTTCGTGCACTCGGACGGTGCCATCTCCTGTCACGACATGTTTGATTTTCTGCATCTCACAGGAGGGGGCTACGCAAAGATTTGCAAACCCCTCCATGAACTGATCATGCAATTGTTGGAGGAAACACCTGAGGAAAAACAAACCACCATTGCCTGA

Related Sequences

bmy_03294T0 SequenceType object (3)

Length: 299 aa      View alignments
>bmy_03294T0
MASVRGHSTLSRMPSPHYGEPEVGVLQRVLRLEEGRAGAGPPGLSERQTRDPPTPQPLGARTDPVPECRMSQGDSNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEEKQTTIA*