Part of scaffold_96 (Scaffold)

For more information consult the page for scaffold_96 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC13 ENSTTRG00000009750 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009244, Bottlenosed dolphin)

Protein Percentage 95.63%
cDNA percentage 97.5%
Ka/Ks Ratio 0.43669 (Ka = 0.0199, Ks = 0.0455)

CCDC13 ENSBTAG00000013015 (Cow)

Gene Details

coiled-coil domain-containing protein 13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017304, Cow)

Protein Percentage 93.11%
cDNA percentage 93.01%
Ka/Ks Ratio 0.1281 (Ka = 0.0319, Ks = 0.2488)

CCDC13  (Minke Whale)

Gene Details

coiled-coil domain containing 13

External Links

Gene match (Identifier: BACU015666, Minke Whale)

Protein Percentage 97.34%
cDNA percentage 98.65%
Ka/Ks Ratio 0.5682 (Ka = 0.0118, Ks = 0.0207)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1923 bp    Location:750336..721855   Strand:-
>bmy_03307
ATGCAGGAGATGCAGCACAGAAGGTTACAGAAGCAGATGGAGAAACGGAAGGAAAAAGAACTTAGCCTCCAAAGCAGAGTTGATGACCAAAAAGAGCCCCTGGAGATCTCTGATGGCCTCAGCGTCCTCCAAGCCGGGGAGCAGAACTCAAAAACCAGCTTTGAACAGAGGATGCTTGAAGACGAGATCGAACGGCTTCGGGATCAACTCAGGGAAACAGTGGATGAGAACGGGCGATTGTATAAGTTGCTGAAGGAGAGGGACTTTGAAATCAAACACCTCAAAAAGAAAATAGAAGAGGACAGATTTGCCTTCACAGGGACGGCTGGTGTGGCTGGGGACGTGACTGCCACCAAGATCGTTGAGTTGTCCAAAAAGAACCGGGTGCTGATGGCAGAGTCCGAGGGTGCGAAGACCAGAGCGAGGCAGCTGAGCAACCGCATCCAGGAGCTGGAGCGAGAGCAGGACAGCCCAGAGGTGAAGGTCTTGCAGGACAGGCTGGCGGCCACAAACCTGAAGATGAGTGACCTCCGCAACCAGATCCAGGCTGTGAAGCAGGAGCTCCGGATGGCCCAGAAGGTGTTAACCAGTGAGGTTGGGGAAGATGTGAACATCCAGCAGCTCCTGTCCTCGCCTGGGACGTGGAGGGGTCGAGCTCAACAAATTCTCGTCTTGCAGAGCAAGATTCGAGAGCTTGAGAAACAGCTGGGACAGACTCGGAGCCGGTCGGTAGAAACAGCCAGTGATGAGTTGTCTGTCTATCCCGATCCAAGGAAGCTGTCGGCACAGGAGAAAAATCTGCTGAGGATCCGCAACCTGGAGAGGGAAAAACAGGAAAGCTGGGAGAAACTTGCAGCAGAGCGGGATGCCCTCCAGAGAGAGCTCGAAGAGCTGAAAAAGAAGTTTGAGGGCGTGAGGTCCCGGAACAAGGTGCTGTCGAGCGAAGTGAAGACCCTCAGGAGTCAGATGGGGACCCTCGTGGAGAAGGGCCGGCATGACGACGAGCTCATCGACGCCCTCATGGACCAGCTGAAGCAGCTACAGGAGATTCTGGGCAGCCTGAGTCTGCAGGAGGAGAAGACGCGAGTGTCCCAGCACCACCTGGACCAGCAGCTCAACAATGAGGCCCAGCAGAGCAGCAGCCTCGTGGCCCAGCTGCGGGCCACGGTGGCTGAGCGGGAGGCCAAGGTGCGGCAGCTGGAGGTGGAGATCGGGCAACTCAGTATGCAGTATCTTCGGAATAAAGGAGTAGGCGAGGGGTCCAGTGGGCCCGAGGTCAACCCGGCCTCCACCAAGTTCCCCGAGGACCCAGGCCTGACCAAGTCCCCGGCCTCAGCAGGCGATCACGCTGGCAGGCTTGGATCTTCTCGGTTCTCGGACTCCCCAGAACAAAAAGCCTGGCAGACACAGGTGACAGAGTTCAAAGCCCTGTGGCAGGCCGCTGAGGTGGAGCGTGACCGGCTCACCGAGTTTGTCACCGTTCTGCAGAAACGGGTGGAGGAGAGCAACAGCAAGCTTCTGGAGTCAGAGAGGAAGCTGCAGGAGGAGCGGCACCGCACCGTGGTGCTGGAGCAGCACCTGGAGAAGATGCGCCTGCAGCCTGGGAGGATGTCAGCTTCTCAGAGAGCAGCCCCCAGGAGCAAAACAGGTGTGCCCACCTCTAACACCAGGCACAACCCAAAGGAGAGTGAGAGGAAGGACCCATCTTCCGCCCAGATCTCCAGTGTGCCCGTGGAATCCCAGATGGAGGAGCTGACCACCAGGCTGGCCATCCAGGTGGAGGAGAACGAAATGCTGAAGGCTGCCCTAGGCAGTGCCCTCCAGGGAAAGGAGGAGGACTTCCGAACGTACCATGAGACCCTGGGCCAGGTGAAAGGGGTCTTCCTGCAGGCCCTGCGGCAGCAGAAGGCGGACAAGCACTAG

Related Sequences

bmy_03307T0 Protein

Length: 641 aa      View alignments
>bmy_03307T0
MQEMQHRRLQKQMEKRKEKELSLQSRVDDQKEPLEISDGLSVLQAGEQNSKTSFEQRMLEDEIERLRDQLRETVDENGRLYKLLKERDFEIKHLKKKIEEDRFAFTGTAGVAGDVTATKIVELSKKNRVLMAESEGAKTRARQLSNRIQELEREQDSPEVKVLQDRLAATNLKMSDLRNQIQAVKQELRMAQKVLTSEVGEDVNIQQLLSSPGTWRGRAQQILVLQSKIRELEKQLGQTRSRSVETASDELSVYPDPRKLSAQEKNLLRIRNLEREKQESWEKLAAERDALQRELEELKKKFEGVRSRNKVLSSEVKTLRSQMGTLVEKGRHDDELIDALMDQLKQLQEILGSLSLQEEKTRVSQHHLDQQLNNEAQQSSSLVAQLRATVAEREAKVRQLEVEIGQLSMQYLRNKGVGEGSSGPEVNPASTKFPEDPGLTKSPASAGDHAGRLGSSRFSDSPEQKAWQTQVTEFKALWQAAEVERDRLTEFVTVLQKRVEESNSKLLESERKLQEERHRTVVLEQHLEKMRLQPGRMSASQRAAPRSKTGVPTSNTRHNPKESERKDPSSAQISSVPVESQMEELTTRLAIQVEENEMLKAALGSALQGKEEDFRTYHETLGQVKGVFLQALRQQKADKH*