Sequence details bmy_03354 (Coding sequence)

Part of scaffold_98 (Scaffold)

For more information consult the page for scaffold_98 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SQSTM1 ENSTTRG00000004432 (Bottlenosed dolphin)

Gene Details

sequestosome 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004172, Bottlenosed dolphin)

Protein Percentage 97.23%
cDNA percentage 96.92%
Ka/Ks Ratio 0.21443 (Ka = 0.0161, Ks = 0.0752)

BT.105440 ENSBTAG00000015591 (Cow)

Gene Details

sequestosome-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020709, Cow)

Protein Percentage 92.38%
cDNA percentage 90.45%
Ka/Ks Ratio 0.13995 (Ka = 0.0436, Ks = 0.3113)

Additional orthologs identified in other species via the OPTIC pipeline.

SQSTM1 (Human)   Sqstm1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1443 bp    Location:1574366..1585989   Strand:+
Raw sequence 
>bmy_03354
ATGGCGTCGCTCACCGTGAAGGCCTACCTTCTGGGCAAGGAGGACGCAGCCCGCGAGATCCGCCGCTTCAGCTTCTGTTTTAGCCCGGAGCCCGAAGCGGAAGCTGAGTCCACAGCTGGCTCCCGGCCCTGCGAGCGGCTGCTGAGCCGGGTGGCCGCCCTGTTCCCCGTACTACGGCCCGGCGGCTTCCAGGCTCACTACCGCGATGAGGACGGGGACTTGGTTGCCTTTTCCAGTGACGAGGAACTGAAGATGGCGATGTCATATGTGAAGGATGACATCTTCCGTATTTACATTAAAGAGAAGAAGGAGTGCCGGCGGGACCACCGACCCCTGTGTGCTCAGGAGGTGCCCCGAAACATGGTGCACCCCAACGTTATCTGTGATGGTTGCAATGGGCCAGTGGTGGGGACCCGCTACAAGTGCAGCGTCTGCCCTGACTACGACCTATGCTCCGTCTGCGAGGGGAAGGGCATGCACAGGGAGCACAGCAAGCTTGCCTTCCCCAGCCCCTTCGGGCACCCTTCTGAGGGCTTCTCTCACAGCCGCTGGCTCCGGAAGCTGAAACACGGGCACTTTGGGTGGCCTGGCTGGGAGATGGGCCCACCGGGGAACTGGAGCCCACGTCCTCCTCGAGTGGGGGATGCCCACCCTGGCCCTGCTGCAGAATCTGCTTCTGGTCCATCGGAGGATCCCAGCGTGAATTTCCTCAAGAATGTAGGGGAGAGTGTGGCAGCTGCCCTCAGCCCTCTGGGCATTGAAGTCGACATTGACGTGGAACATGGAGGAAAGAGAAGCCGCCTGACACCCACCTCCCCAGGCAGCTCCAGCCCAGAGGAGAAGTGTAGCTCTCAGCCAAGCAGCTGCTGCTCCAACCCCAGCAAGCCGGACGGGGATGTGGAGGGCATGGCACAGTCTCTGGTGGAGCAAGTGAACAAGATCACCCTAGAGTCAGGGGGTCAGCCTGAGGCAAGCACCCTCCCACGCCATCCCCAGGTTGTGGCCGCCCAGAGCTTCTCCCAGCACCCCAAGCACAGCCCTTCCCTGGCACTCACACAGCCAGAGGGACCCATTTCTGTTGCAGGATGTCGGCGGCATTTAAGTTGTTCTGAACAGATGGAGTCTGATAACTGTTCAGGAGGAGATGATGACTGGACTCATTTGTCTTCAAAAGAGGTGGACCCGTCTACAGGTGAACTCCAGTCTTTACAGATGCCTGAATCTGAAGGGCCAAGCTCTCTGGACCCTTCCCAGGAAGGACCCACAGGGCTGAAGGAAGCTGCATTGTACCCACATCTGCCACCAGGCAAGAGATTTCAAATGCTATCCATGGGGTTCTCTGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGACCAAGGATTATGACATCGGGGCTGCCCTGGACACCATCCAGTATTCAAAACACCCACCACCGTTGTGA

Related Sequences

bmy_03354T0 Protein

Length: 481 aa      View alignments
>bmy_03354T0
MASLTVKAYLLGKEDAAREIRRFSFCFSPEPEAEAESTAGSRPCERLLSRVAALFPVLRPGGFQAHYRDEDGDLVAFSSDEELKMAMSYVKDDIFRIYIKEKKECRRDHRPLCAQEVPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGMHREHSKLAFPSPFGHPSEGFSHSRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRVGDAHPGPAAESASGPSEDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPTSPGSSSPEEKCSSQPSSCCSNPSKPDGDVEGMAQSLVEQVNKITLESGGQPEASTLPRHPQVVAAQSFSQHPKHSPSLALTQPEGPISVAGCRRHLSCSEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPGKRFQMLSMGFSDEGGWLTRLLQTKDYDIGAALDTIQYSKHPPPL*