Sequence detailsbmy_03364 (Coding sequence)

Part of scaffold_95 (SequenceType object (1))

For more information consult the page for scaffold_95 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PBXIP1ENSTTRG00000016178 (Bottlenosed dolphin)

Gene Details

pre-B-cell leukemia homeobox interacting protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015335, Bottlenosed dolphin)

Protein Percentage 92.53%
cDNA percentage 95.11%
Ka/Ks Ratio 0.50158 (Ka = 0.0426, Ks = 0.0848)

PBXIP1ENSBTAG00000004552 (Cow)

Gene Details

Pre-B-cell leukemia transcription factor-interacting protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005980, Cow)

Protein Percentage 83.59%
cDNA percentage 88.27%
Ka/Ks Ratio 0.36317 (Ka = 0.0975, Ks = 0.2683)

PBXIP1 (Minke Whale)

Gene Details

pre-B-cell leukemia homeobox interacting protein 1

External Links

Gene match (Identifier: BACU007466, Minke Whale)

Protein Percentage 91.98%
cDNA percentage 93.86%
Ka/Ks Ratio 0.53136 (Ka = 0.0555, Ks = 0.1044)

Additional orthologs identified in other species via the OPTIC pipeline.

PBXIP1 (Human)   Pbxip1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2469 bp    Location:170735..160148   Strand:-
Raw sequence 
>bmy_03364
ATGGCCTCCTGCCCAGACTCGGACAATAGCTGGGTGCTTGCCGGCTCAGAGAACCTGCCTGTGGAGACCCTGGGCCCTGAATCCAGGATGGACCCAGAATCTGAGAGAGCTCCCCAGGCCCCTTGGAGCCCCTCCAAGGCAGCTGCTGAGAAATTAGCTGGGACCTTGGATGGAGAAGAGACCCTGTTCCAGAGTGAGAGCTCCCAGTCCAGGCCCATTCTGCCAGAGGAGACTGAGGCCAAGGGTGTCCTGGAAGGTGATGATCGTGGAATGGAGCCCCCTGGCCCAGGAGACACAGAGGCCCAGGGAGACTTGGAGGAGACCCCCGAGGCGGTAGCTCTGGGACCGGACACACAGGACCTGGAGGATCAGGGTCCCCCCAACAGCCTGCCCTCATCCCCCCAGACAGCTTGGATCAGGGAGGAGGCCCACTGCTCCAGCAGTGAGGACGACACCGACATGGACATGGAGGGTCTGCGGAGACGGCGGGGCCGGGAGCCCAGCATTCCTCAGCCTGCGGCCCCCCTGGGTGTGGAGGACCAGGCCGGGGCTGAGGGTGCGGGCAGGGAGCTGGGCATCTCCCTCAACATGTGTCTCCTCGGGGCCCTGGTTCTGCTGGGCCTGGGGATCCTCCTCTTCTCCGGGCCCGTGGAGGAAGCGGACCTGCAGGTCTTCCCAGATACCGGCTCGGATACTGAGATGCTGGAGGCTGAGGAGGATGGGCAGGCATGTGTGACACTCTGCATTGGTGATGGGCTAAAGCAGCAGCTGCAAACCTCAGCGCCCCCTGACAGTGTTCCCAGCCTGCAGAACATGGCCCTTCTGCTGGACAAGCTGGCCAAGGAGAACCAGGATATCCGGCTGCTGCAGGCCCAGCTGCAGGCCCAGAAGGAAGAGCTTCAGAGCCTGATGCATCAGCCCAAAGGGCTGGAAGAGGAGAATGCCCGGCTCCGAGGGGCCCTACAGCAGGGCGAGGCCTCCCAGCGGGCCCTGGAGTTAGAGCTGCAGCAGCTGCGGGCCCAGCTCCAGGGCCTGGAGGCTGACTGTGTCCGGGGCACAGATGGGGTGTGTCTCTATGGGGGCAGAGGCCTGCGGGCTGGCAAGGTCACCAAGGAGCAAGGCCCAAGGGGGCATGTGCCAAGCCCTGGCTTCCTGGAGCAGAAGAAACAGCTAGAGGCTGAGGCCCAGGCATTAAGGCAAGAGTTGGAGAGGCAGCGGCGGCTGCTGGGGTCTGTGCAGCGGGACCTGGAGCAGAGCTTGAGGGATGCGGGCCGAGGGGACCCAGCCCATGCTGGCCTGGCTGAGGTGGGTCACAGGCTGGCCCAGAAGCTGCGGCGCCTGGAGAACTGGGGCCAGCGCCCTGGGGTCCCTGCCAACGCCTCAGAGGCCTGGCATCAGGAGCCTCACTTCCAGAGTTCCAGGGAGTGGAGCGGAAAGGAAAAGTGGTGGGATGGGCAGAGGGACCGGAAGACTGACCACTGGAAACATAAGAAGGAGGAATCTGGCCGGGAAAAGAAGAAGAGCTGGGGGGGTGAGGAGGACAGGGAGCTGGTGGGGAGGTGGAAGGAGGGCAAGCCAAGGGTGGAGGAGTGGGCCAGCAAGAAGGATGGCAAGCGACAGGGTTCTAAGGAGCCCCCCAGGAAAAGTGGGAGCCCCCACTCCTCCAGAGAAAGGCAGAAACACCCTCAGTGGAAGGAGGGGGCTAAAGACAGGCATGACCCCCTGCCACTCTGGGCAGAGCTGTTGAGGCACAAGTACCAGGCACCCCAGGGCTGCTCGGGCGTGCACGAGTGTGCCCGCCAGGAGGGCCTGGCCTTCTTTGGCATGGAGCTGGCCCCTGTGCGGCAACAGGAGCTGGCCTCTCTGCTGAGGACGTACCTGGCGCGGCTGCCCTGGGCCGGGCAACTGACCAAGGAGCTACCCCTTTCTCCTGCTTACTTTGGTGAGGACGGTATCTTCCGCCACGACCGCCTCCGCTTCCGGGACTTTGTAGATGCCTTGGAGGACAGCCTGGAGGAGGTGGCAGTGAGACAGACAGGTGATGACGATGAGGTGGATGACTTTGAGGACTTCATCTTCAGCCACTTCTTTGGAGACAAAGCACTGAAGAAGAGGTGGGCAAGCTGTGGGGGAGTTGGGTCAGTGGGACAGAGCAGGAGGCAGGAGGTGATGGTCTGGGAAGAAGGACAAACACTGGCGGAACCCCAGAGTTGTGGGGCCCAGGGAGGAACACAGCCACCAGCGCCAGGGCTGAGGCCCCGTGCTGTCTGTCCCCTGGGAACCGTAAAACTGCCACCTCCCTTGGCTCGTTTGGTGTCCTTGGATATCCTTCACCGAGGAGAGCGGAAATCACCCAGCCCCGCACTGAAACCACTTTTGCTAGAAAAAGGTCTTAGCTGGACCTGCCTTGCTATCTATGCAAATGTATGCAAATGCTCAGGGCCCTGGGCCGTGACTCTTGCAGCCTGA

Related Sequences

bmy_03364T0 SequenceType object (3)

Length: 823 aa      View alignments
>bmy_03364T0
MASCPDSDNSWVLAGSENLPVETLGPESRMDPESERAPQAPWSPSKAAAEKLAGTLDGEETLFQSESSQSRPILPEETEAKGVLEGDDRGMEPPGPGDTEAQGDLEETPEAVALGPDTQDLEDQGPPNSLPSSPQTAWIREEAHCSSSEDDTDMDMEGLRRRRGREPSIPQPAAPLGVEDQAGAEGAGRELGISLNMCLLGALVLLGLGILLFSGPVEEADLQVFPDTGSDTEMLEAEEDGQACVTLCIGDGLKQQLQTSAPPDSVPSLQNMALLLDKLAKENQDIRLLQAQLQAQKEELQSLMHQPKGLEEENARLRGALQQGEASQRALELELQQLRAQLQGLEADCVRGTDGVCLYGGRGLRAGKVTKEQGPRGHVPSPGFLEQKKQLEAEAQALRQELERQRRLLGSVQRDLEQSLRDAGRGDPAHAGLAEVGHRLAQKLRRLENWGQRPGVPANASEAWHQEPHFQSSREWSGKEKWWDGQRDRKTDHWKHKKEESGREKKKSWGGEEDRELVGRWKEGKPRVEEWASKKDGKRQGSKEPPRKSGSPHSSRERQKHPQWKEGAKDRHDPLPLWAELLRHKYQAPQGCSGVHECARQEGLAFFGMELAPVRQQELASLLRTYLARLPWAGQLTKELPLSPAYFGEDGIFRHDRLRFRDFVDALEDSLEEVAVRQTGDDDEVDDFEDFIFSHFFGDKALKKRWASCGGVGSVGQSRRQEVMVWEEGQTLAEPQSCGAQGGTQPPAPGLRPRAVCPLGTVKLPPPLARLVSLDILHRGERKSPSPALKPLLLEKGLSWTCLAIYANVCKCSGPWAVTLAA*