Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EFNA1 ENSTTRG00000016164 (Bottlenosed dolphin)

Gene Details

ephrin-A1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015321, Bottlenosed dolphin)

Protein Percentage 74.63%
cDNA percentage 81.46%
Ka/Ks Ratio 0.60146 (Ka = 0.196, Ks = 0.3259)

EFNA1 ENSBTAG00000020244 (Cow)

Gene Details

Ephrin-A1 Ephrin-A1, secreted form

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004007, Cow)

Protein Percentage 65.37%
cDNA percentage 74.47%
Ka/Ks Ratio 0.43907 (Ka = 0.2732, Ks = 0.6222)

EFNA1  (Minke Whale)

Gene Details

ephrin-A1

External Links

Gene match (Identifier: BACU007458, Minke Whale)

Protein Percentage 65.68%
cDNA percentage 71.34%
Ka/Ks Ratio 0.34802 (Ka = 0.2914, Ks = 0.8373)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 996 bp    Location:320856..327186   Strand:+
>bmy_03376
GGCGGGGCGGGGTGTCGGGCGGCGCCGGCCCAAAAGGCGGAGTCGCGAGGCGGAGGGCCCAGAGCTGTGAGCACTGTGCTGAGTGCGCCGCGGAGAAAGCCTGCGGGAACCCAGACCCGGAGGAGCCCCTCGTCCCCGCCCGGCCTGGCCCGGCCCCGCGCTATGGAGTTCCTCTGGGCCCCTCTCTTGGGTCTGTGCTGCAGTCTGGCCGCTGCTGACCGCCACACCGTCTTCTGGAACAGTTCAAACCCCAAGGTGGGGGAGGGGCCTTGGTTTCGGAGTGAGGACTACACAGTACACGTGCAGTTAAATGACTACCTGGACATCATCTGTCCTCATTATGAGGATGACTCTGTGGCAGACGCTGCCATGGAGCGGTACACACTGTACCTGGTGGAGCATGAGCAGTACCAACTGTGCCAACCCCAATCCAAGGACCAGGTCCGCTGGCAGTGCAACCAGCCCAGTGCCAGGCATGGCCCAGAGAAGCTGTCTGAGAAGTTCCAGCGCTTTACACCCTTTACCCTGGGCAAGGAGTTCAAAGAGGGACACAGCTACTACTACATCTCCAAACCCATCCACCACCAGGAAGACCAGTGCTTGAGGTTGAAGGTGACCGTCAGTGGCAAAATCAGTGAGTGTCACAGCCTTGTGGGCCTCCTTGCTGCATCCCTATCCTGGGCCTGGTCTAGTGATCTGGGATGGTTGGGAAGTCCCACTGCCCAGCCCACCCAGCATTCCCACCCCTCTGCTTCCTTGGTGTACCAAGTACCTGACCTAAGACCACYCTTTCAGCTCACAGTCCTCAGGCCCATGCCAATGCACAGGAGAAGAGACTTCCAGCAGATGACCCAGAGGTGCAGGTTCTACATAGCATTGGTCACAGTGCCGCCCCCCGCCTCTTCCCACTCGCCTGGGCTGTGCTGCTCCTGCCATTCCTGCTGCTGCAAACCCCATGAAGGTGTATGCCGCACGCACTGTAAGAACTGGAACTGA

Related Sequences

bmy_03376T0 Protein

Length: 332 aa      View alignments
>bmy_03376T0
GGAGCRAAPAQKAESRGGGPRAVSTVLSAPRRKPAGTQTRRSPSSPPGLARPRAMEFLWAPLLGLCCSLAAADRHTVFWNSSNPKVGEGPWFRSEDYTVHVQLNDYLDIICPHYEDDSVADAAMERYTLYLVEHEQYQLCQPQSKDQVRWQCNQPSARHGPEKLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHHQEDQCLRLKVTVSGKISECHSLVGLLAASLSWAWSSDLGWLGSPTAQPTQHSHPSASLVYQVPDLRPXFQLTVLRPMPMHRRRDFQQMTQRCRFYIALVTVPPPASSHSPGLCCSCHSCCCKPHEGVCRTHCKNWN*