Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM46 ENSTTRG00000009399 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 46

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008923, Bottlenosed dolphin)

Protein Percentage 98.4%
cDNA percentage 98.27%
Ka/Ks Ratio 0.18844 (Ka = 0.0088, Ks = 0.0467)

TRIM46 ENSBTAG00000010622 (Cow)

Gene Details

tripartite motif-containing protein 46

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014043, Cow)

Protein Percentage 98.95%
cDNA percentage 94.86%
Ka/Ks Ratio 0.01878 (Ka = 0.0047, Ks = 0.2493)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2280 bp    Location:347952..356918   Strand:+
>bmy_03380
ATGGCTGAGGGTGAGGAAATGCAGGCCTTCACTTCCATCATGGATGCACTGGTCCGCATCAGTACGAGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACCCACAATGTATGCCAGGCCTGTGCCCGGGAGGTGCTGGGCCAGCAGGGCTACGTAGGCCATGGTGGGGACCCCAGCTCTGAGCCCACCTCTCCTGCCTCCACCCCTTCTACCCGAAGTCCCCGCCTCTCCCGCAGAACTCTCCCCAAGCCAGACCGCTTGGACCGACTGCTTAAGTCAGGCTTTGGGACATACCCCGGGCGGAAGCGAGGTGCTCTGCACCCTCAGGTGATCATGTTTCCGTGCCCAGCCTGCCAGGGCGATGTGGAGCTGGGGGAGCGGGGCTTGGCAGGGCTGTTCCGGAACCTGACCCTGGAGCGTGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGGTGGCGCCATCCTGTGCCAGCTGTGCAAGCCCCCGCCACTAGAGGCCACCAAGGGCTGCACTGAGTGCCGCGCCACCTTCTGCAACGAATGCTTCAAGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCTGCCCACCCTCTCCTTCCGCCCCAAGGGCCTGATGTGCCCAGATCACAAGGAAGAGGTGACCCACTACTGCAAGACATGCCAACGACTGGTATGCCAACTCTGCCGTGTGCGACGCACCCACAGYGGCCACAAGATCACACCTGTGCTCAGTGCCTACCAGGCCCTCAAGGACAAGCTGACAAAGAGCCTGACATACATCCTGGGAAACCAGGACACAGTACAGACCCAGATCTGTGAGCTGGAGGAGACCGTGAGGCACACTGAGGTGAGTGGTCAGCAGGCCAAGGAGGAGGTGTCCCAGCTGGTGCGGGGGCTGGGGGCTGTGCTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATTGAGGAGTGCCAGCAGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTACGCTCAGGAGGTTCTTAAGGAAACAGACCAGCCTTGCTTTGTGCAAGCAGCCAAACAGCTGCACAACAGGATTGCCCGAGCTACGGAGGCCCTCCAGATGTTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTGGACGTGGGGCGTGAGATGAAGCTGCTGACAGAGCTTAACTTCCTGCGAGTGCCTGAGGCTCCGGTCATTGACACCCAGCGCACCTTTGCCTACGACCAGATCTTCCTGTGCTGGCGGCTGCCCCCCCACTCACCACCTGCCTGGCACTATACCATTGAGTTCCGGCGCACGGATGTGCCGGCCCTGCCGGGCCCCACCCGCTGGCAGCGGCGGGAAGAGGTGAGGGGCACCAGCGCCCTGCTTGAGAACCCTGACACAGGCTCTGTGTACGTGCTGCGTGTCCGTGGCTGCAACAAGGCCGGCTATGGCGAGTACAGTGAAGATGTGCACCTGCACACGCCCCCAGCGCCCGTCCTGCACTTCTTCCTCGACGGCCGCTGGGGTACAAGCCGAGAGCGGCTGGCCATCAGCAAGGACCAGCGAGCAGTGCGGAGTGTTCCAGGGCTGCCCCTGCTGCTGGCTGCTGAGCGGCTACTGACGGGCTGCCACCTGAGCGTCGATGTGGTCCTGGGCGATGTGGCTGTGACCCAGGGCCGCAGCTACTGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTGAAGGTGGGCGTCGGGCTGGAGAGCAAGCTTCAGGAAAGCTTCCAGGGTGCCCCTGATGTGATCAGCCCCAGGTACGACCCGGACAGTGGGCATGACAGCGGTGCCGAGGATGCCACAGTGGAGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGGCCGGGGCCAGCTCAAATGCAGGGCTGACAGGGAGGGATGGCCCGGCGGCCAGCTGCACAGTGCCCCTGCCGCCCCGCCTGGGCATCTGCCTGGACTACGAGCGGGGTCGGGTTTCCTTCCTGGATGCGGTGTCCTTCCGAGGGCTCCTGGAGTGCCCCCTGGACTGCTCGGGACCTGTGTGCCCTGCCTTTTGTTTCATTGGGGGTGGTGCAGTACAGCTACAGGAGCCCGTGGGCACTAAGCCTGAGAGGAAGGTCACCATTGGGGGCTTTGCCAAGCTGGACTGA

Related Sequences

bmy_03380T0 Protein

Length: 760 aa      View alignments
>bmy_03380T0
MAEGEEMQAFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREVLGQQGYVGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEETVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQMFRPAASSSFRHCQLDVGREMKLLTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTIEFRRTDVPALPGPTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDGRWGTSRERLAISKDQRAVRSVPGLPLLLAAERLLTGCHLSVDVVLGDVAVTQGRSYWACAVDPASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGKILLGAGASSNAGLTGRDGPAASCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD*