Sequence detailsbmy_03380 (Coding sequence)

Part of scaffold_95 (SequenceType object (1))

For more information consult the page for scaffold_95 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM46ENSTTRG00000009399 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 46

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008923, Bottlenosed dolphin)

Protein Percentage 98.4%
cDNA percentage 98.27%
Ka/Ks Ratio 0.18844 (Ka = 0.0088, Ks = 0.0467)

TRIM46ENSBTAG00000010622 (Cow)

Gene Details

tripartite motif-containing protein 46

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014043, Cow)

Protein Percentage 98.95%
cDNA percentage 94.86%
Ka/Ks Ratio 0.01878 (Ka = 0.0047, Ks = 0.2493)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIM46 (Human)   Trim46 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2280 bp    Location:347952..356918   Strand:+
Raw sequence 
>bmy_03380
ATGGCTGAGGGTGAGGAAATGCAGGCCTTCACTTCCATCATGGATGCACTGGTCCGCATCAGTACGAGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACCCACAATGTATGCCAGGCCTGTGCCCGGGAGGTGCTGGGCCAGCAGGGCTACGTAGGCCATGGTGGGGACCCCAGCTCTGAGCCCACCTCTCCTGCCTCCACCCCTTCTACCCGAAGTCCCCGCCTCTCCCGCAGAACTCTCCCCAAGCCAGACCGCTTGGACCGACTGCTTAAGTCAGGCTTTGGGACATACCCCGGGCGGAAGCGAGGTGCTCTGCACCCTCAGGTGATCATGTTTCCGTGCCCAGCCTGCCAGGGCGATGTGGAGCTGGGGGAGCGGGGCTTGGCAGGGCTGTTCCGGAACCTGACCCTGGAGCGTGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGGTGGCGCCATCCTGTGCCAGCTGTGCAAGCCCCCGCCACTAGAGGCCACCAAGGGCTGCACTGAGTGCCGCGCCACCTTCTGCAACGAATGCTTCAAGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCTGCCCACCCTCTCCTTCCGCCCCAAGGGCCTGATGTGCCCAGATCACAAGGAAGAGGTGACCCACTACTGCAAGACATGCCAACGACTGGTATGCCAACTCTGCCGTGTGCGACGCACCCACAGYGGCCACAAGATCACACCTGTGCTCAGTGCCTACCAGGCCCTCAAGGACAAGCTGACAAAGAGCCTGACATACATCCTGGGAAACCAGGACACAGTACAGACCCAGATCTGTGAGCTGGAGGAGACCGTGAGGCACACTGAGGTGAGTGGTCAGCAGGCCAAGGAGGAGGTGTCCCAGCTGGTGCGGGGGCTGGGGGCTGTGCTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATTGAGGAGTGCCAGCAGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTACGCTCAGGAGGTTCTTAAGGAAACAGACCAGCCTTGCTTTGTGCAAGCAGCCAAACAGCTGCACAACAGGATTGCCCGAGCTACGGAGGCCCTCCAGATGTTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTGGACGTGGGGCGTGAGATGAAGCTGCTGACAGAGCTTAACTTCCTGCGAGTGCCTGAGGCTCCGGTCATTGACACCCAGCGCACCTTTGCCTACGACCAGATCTTCCTGTGCTGGCGGCTGCCCCCCCACTCACCACCTGCCTGGCACTATACCATTGAGTTCCGGCGCACGGATGTGCCGGCCCTGCCGGGCCCCACCCGCTGGCAGCGGCGGGAAGAGGTGAGGGGCACCAGCGCCCTGCTTGAGAACCCTGACACAGGCTCTGTGTACGTGCTGCGTGTCCGTGGCTGCAACAAGGCCGGCTATGGCGAGTACAGTGAAGATGTGCACCTGCACACGCCCCCAGCGCCCGTCCTGCACTTCTTCCTCGACGGCCGCTGGGGTACAAGCCGAGAGCGGCTGGCCATCAGCAAGGACCAGCGAGCAGTGCGGAGTGTTCCAGGGCTGCCCCTGCTGCTGGCTGCTGAGCGGCTACTGACGGGCTGCCACCTGAGCGTCGATGTGGTCCTGGGCGATGTGGCTGTGACCCAGGGCCGCAGCTACTGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTGAAGGTGGGCGTCGGGCTGGAGAGCAAGCTTCAGGAAAGCTTCCAGGGTGCCCCTGATGTGATCAGCCCCAGGTACGACCCGGACAGTGGGCATGACAGCGGTGCCGAGGATGCCACAGTGGAGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGGCCGGGGCCAGCTCAAATGCAGGGCTGACAGGGAGGGATGGCCCGGCGGCCAGCTGCACAGTGCCCCTGCCGCCCCGCCTGGGCATCTGCCTGGACTACGAGCGGGGTCGGGTTTCCTTCCTGGATGCGGTGTCCTTCCGAGGGCTCCTGGAGTGCCCCCTGGACTGCTCGGGACCTGTGTGCCCTGCCTTTTGTTTCATTGGGGGTGGTGCAGTACAGCTACAGGAGCCCGTGGGCACTAAGCCTGAGAGGAAGGTCACCATTGGGGGCTTTGCCAAGCTGGACTGA

Related Sequences

bmy_03380T0 SequenceType object (3)

Length: 760 aa      View alignments
>bmy_03380T0
MAEGEEMQAFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREVLGQQGYVGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEETVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQMFRPAASSSFRHCQLDVGREMKLLTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTIEFRRTDVPALPGPTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDGRWGTSRERLAISKDQRAVRSVPGLPLLLAAERLLTGCHLSVDVVLGDVAVTQGRSYWACAVDPASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGKILLGAGASSNAGLTGRDGPAASCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD*