Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HCN3 ENSTTRG00000009465 (Bottlenosed dolphin)

Gene Details

hyperpolarization activated cyclic nucleotide-gated potassium channel 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008973, Bottlenosed dolphin)

Protein Percentage 96.92%
cDNA percentage 96.5%
Ka/Ks Ratio 0.30027 (Ka = 0.0231, Ks = 0.077)

HCN3 ENSBTAG00000017055 (Cow)

Gene Details

potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022679, Cow)

Protein Percentage 95.02%
cDNA percentage 92.89%
Ka/Ks Ratio 0.14098 (Ka = 0.0324, Ks = 0.2301)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2403 bp    Location:426199..435284   Strand:+
>bmy_03387
ATGGAGGCGGAGCAGCGGCCGACGACTAGGGCCAGCGATGGGGCGACCCCTGGGCTGGAGAGGGCGCCTCCTGCTGCCCCGGCGTCTACAACCACGGCCTCGGATGCGATCCCTGGGTCCAGGCCCGGGACCGGGCCCGAGCCCAAGAGGAGGCAGCTCGGGACGCTGCTCCAGCCCACGGTCAACAAGTTCTCCCTTCGCGTGTTCGGCAGCCACAAAGCAGTGGAAATCGAGCAGGAGCGGGTCAAGTCAGCGGGGGCCTGGATCATCCACCCCTACAGCGACTTCCGTCTCCTGTGGATCTCCCTCCCCTCCCCCATTTCACCCTCAGATCTTCCACCACAGCAGTATGGCTCTCCCCTGCCCATGCCCTTGCCTGGGCTCAGCCAGAGTCCCATTGGGCACAGGAAGGAGGAGAACTCCCCACCTTGGATCGTCTTCAACGTCCTCTCTGACACTTTCTTCCTGATGGATCTGGTGCTCAACTTCCGCACRGGCATCGTGGTAGAGGAGGGTGCTGAGATCCTGCTGGCACCGCGGGCCATCCGCACACGCTACCTGCGCACCTGGTTCCTGGTTGACCTTATCTCCTCTATTCCTGTGGATTACATTTTCCTGGTGGTGGAGCTGGAGCCACGACTGGACACCGAGGTCTACAAAACAGCTCGGGCCCTGCGCATCGTGCGTTTCACCAAGATCCTCAGCCTGCTGCGGCTGCTCCGCCTTTCCCGCCTCATCCGCTACATACACCAGTGGGAGGAGATCTTTCACATGACCTATGACCTGGCCAGTGCTGTGGTTCGCATCTTCAACCTCATCGGAATGATGCTGCTGCTATGTCACTGGGATGGCTGTCTGCAGTTCCTGGTCCCCATGCTGCAGGACTTCCCTCCCGACTGCTGGGTCTCCATCAACCATATGGTGAACCACTCATGGGGCCGCCAGTATTCCCACGCCCTGTTCAAGGCCATGAGCCACATGCTCTGCATTGGCTACGGGCAGCAGGCACCTGTAGGCATGCCCGACGTCTGGCTCACCATGCTCAGCATGATCGTGGGCGCCACGTGCTACGCCATGTTCATCGGCCACGCCACCGCCCTCATCCAGTCCCTGGACTCTTCTCGGCGTCAGTACCAGGAGAAGTACAAGCAGGTGGAGCAGTATATGTCCTTCCACAAGCTGCCAGCTGACACACGGCAGCGCATCCATGAGTACTATGAGCACCGCTACCAGGGCAAGATGTTTGATGAGGAAAGCATCCTAGGAGAGCTGAGCGAACCGCTTCGGGAGGAGATCATTAACTTCACCTGCCGGGGCCTCGTGGCCCACATGCCGCTGTTCGCCCACGCCGACCCCAGCTTCGTCACGGCCGTGCTCACCAAGCTACGCTTTGAGGTCTTCCAGCCGGGGGACCTCGTGGTGCGTGAGGGCTCCGTGGGCAGGAAGATGTACTTCATCCAGCATGGGCTGCTCAGTGTGCTGGCACGTGGCGCCCGGGACACCCGCCTCACTGATGGATCGTACTTTGGGGAAATCTGTCTGCTGACTCGGGGCCGACGCACAGCCAGTGTGCGTGCTGACACCTACTGCCGCCTCTACTCGCTCAGTGTGGACCATTTCAACGCCGTGCTCGAGGAGTTCCCCATGATGCGCCGGGCCTTCGAGACAGTGGCCATGGATCGGCTGCGCCGCATTGGCAAGAAGAATTCCATACTGCAGCGGAAGCGCTCTGAGCCAAGTCCAGGCAGCAGTGGGGGCATCATGGAGCAGCACTTGGTGCAGCACGACAGGGATATGGCTCGGGGCGTTCGGGGCCTGGCCCCAGGCACAGGAGCTCGGCTCAGCGGAAAGCCGGTGCTGTGGGAGCCACTAGTGCACGCACCCCTGCAAGCAGCCGCCGTGACCTCCAATGTGGCCATTGCCCTGACGCACCAGCGGGGCCCTCTCCCCCTCTCCCCTGACTCTCCAGTCACCCTCCTTGCTCGCTCTGCTCGAAGATCAGCAGGAGCAGGCTCCCCAGCCTCCCCACTTGTCCCTGTCCGAGCTGGCCCTCTGCTGGCCCGGGGGCCTTGGGCATCCACCTCCCGCCTGCCGGCCCCACCGGCCCGAACCCTCCATGCCAGCCTGTCCCGGGCTGGGCGCTCCCAGGTGTCACTGCTGGGKCCTCCCCCGGGAGGAGGTGGACGGCGACTAGGACCTCGGGGCCGCCCACTCTCAGCCTCCCAGCCCTCTCTGCCTCAGCGGGCGGCAGGTGATGGCTCTCCTGGGTGTAAGGGCTCAGGAAGTGAACGCCTGCCCCCCTCAGGGCTCCTGGCTAAGCCTCCAGGGACAGCCCAGCCCCCCAGGCCATCAGTGCCTGAGCCAGCCACTCCCCGGGGCCCCCAGCTCTCTTCCAACATGTGA

Related Sequences

bmy_03387T0 Protein

Length: 801 aa      View alignments
>bmy_03387T0
MEAEQRPTTRASDGATPGLERAPPAAPASTTTASDAIPGSRPGTGPEPKRRQLGTLLQPTVNKFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRLLWISLPSPISPSDLPPQQYGSPLPMPLPGLSQSPIGHRKEENSPPWIVFNVLSDTFFLMDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISSIPVDYIFLVVELEPRLDTEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNHSWGRQYSHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAMDRLRRIGKKNSILQRKRSEPSPGSSGGIMEQHLVQHDRDMARGVRGLAPGTGARLSGKPVLWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPVTLLARSARRSAGAGSPASPLVPVRAGPLLARGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRPLSASQPSLPQRAAGDGSPGCKGSGSERLPPSGLLAKPPGTAQPPRPSVPEPATPRGPQLSSNM*