Sequence detailsbmy_03400 (Coding sequence)

Part of scaffold_95 (SequenceType object (1))

For more information consult the page for scaffold_95 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SSR2ENSTTRG00000013342 (Bottlenosed dolphin)

Gene Details

signal sequence receptor, beta (translocon-associated protein beta)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012657, Bottlenosed dolphin)

Protein Percentage 88.52%
cDNA percentage 87.43%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.041)

BT.49010ENSBTAG00000001212 (Cow)

Gene Details

translocon-associated protein subunit beta precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000045096, Cow)

Protein Percentage 96.72%
cDNA percentage 95.81%
Ka/Ks Ratio 0.21876 (Ka = 0.0221, Ks = 0.1009)

Additional orthologs identified in other species via the OPTIC pipeline.

SSR2 (Human)   Ssr2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 552 bp    Location:947669..941159   Strand:-
Raw sequence 
>bmy_03400
ATGAGGCTGCTGGCATTCCTGGCGTTGGCTCTATTTGCTGTCACTCAAGCAGAGGAAGGAGCCAGGCTTTTGGCCTCCAAATCACTGCTGAACAGATATGCCGTGGAGGGGCGAGACCTGACCTTACAGTACAACATCTACAATGTTGGCTCAAGTGCTGCATTAGATGTGGAATTATCTGATGATTCCTTCCCTCCAGAAGACTTTGGCATTGTCTCTGGAATGCTCAACGTCAAATGGGACCGAATTGCTCCTGCTAGCAACGTCTCCCACACCGTGGTCCTGCGCCCTCTCAAGGCTGGTTATTTCAACTTCACCTCAGCAACTATTACTTACCTGGCCCAGGAGGATGGGCCCGTTGTGATTGGCTTTACCAGTGCACCTGGACAGGGAGGAATCCTGGCTCAGAGGGAGTTTGATAGAAGATTCTCCCCGCATTTTCTGGACTGGGCAGCCTTCGGGGTCATGACCCTCCCTTCCATCGGCATCCCCCTGCTGTTGTGGTACTCCAGCAAGAGGAAATATGACACCCCCAAAACCAAGAAGAACTGA

Related Sequences

bmy_03400T0 SequenceType object (3)

Length: 184 aa      View alignments
>bmy_03400T0
MRLLAFLALALFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN*