Sequence detailsbmy_03401 (Coding sequence)

Part of scaffold_95 (SequenceType object (1))

For more information consult the page for scaffold_95 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBQLN4ENSTTRG00000013343 (Bottlenosed dolphin)

Gene Details

ubiquilin 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012658, Bottlenosed dolphin)

Protein Percentage 99.83%
cDNA percentage 99.42%
Ka/Ks Ratio 0.03191 (Ka = 0.0008, Ks = 0.0238)

UBQLN4ENSBTAG00000001548 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002028, Cow)

Protein Percentage 97.79%
cDNA percentage 95.87%
Ka/Ks Ratio 0.05954 (Ka = 0.0099, Ks = 0.1666)

UBQLN4 (Minke Whale)

Gene Details

ubiquilin 4

External Links

Gene match (Identifier: BACU003950, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.6%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0194)

Additional orthologs identified in other species via the OPTIC pipeline.

UBQLN4 (Human)   Ubqln4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1905 bp    Location:983254..968475   Strand:-
Raw sequence 
>bmy_03401
CGCCCGGGGCGCTGTGGCTGCGGCTGGTCCGGAGGGGGCGGTGAAGCCTTGGGAAGGGGAGGGGAGAGGGGAGTGTTGGAGGCGCCGGAGCCGAGCCCGGACGGCCGGGCGGGCGGGGAGAAGGAGGAGCCGGGGCGGGCTGGCGGGCGGCCGGGTGGCGGCGGCGGCATGGCGGAGCCGAGCGGGGCCGAGACGAGGCCCCCCATTCGGGTCACCGTCAAGACCCCCAAGGACAAGGAGGAAATTGTGATCTGCGATCGAGCCTCGGTCAAAGAGTTCAAAGAGGAAATCTCCCGGAGATTTAAGGCTCAGCAGGATCAGCTGGTCCTGATCTTCGCAGGCAAGATCCTCAAGGATGGGGACACACTGAACCAGCATGGGATCAAGGATGGGCTCACTGTCCATCTGGTCATCAAGACCCCTCAGAAGGTTCAAGATCCGGCTACTGCCACTGCTTCTTCCCCTTCCACTCCAGACCCAGCCTCAGCGCCCTCCACCACGCCTGCTTCACCTGCCACTTCTGCCCAGCCCTCCACTTCTGGCAGTGCCACTTCGGATACTGGCAGTGGAAGCCGAAGGAGCAGTGGGGGGGGTACCTCCCCAGGGACTGGGGAGGGACCTCCCAGTGCCACTGCATCCATACTCTCTGGCTTTGGGGGCATCCTGGGCCTGGGCAGCCTGGGCCTGGGCTCTGCCAACTTCATGGAGCTGCAGCAGCAGATGCAGAGGCAGCTGATGTCCAATCCTGAGATGCTGTCGCAGATCATGGAGAACCCCCTGGTCCAGGACATGATGTCTAACCCCGACCTGATGCGCCACATGATCATGGCCAACCCCCAGATGCAGCAGCTGATGGAGCGGAACCCCGAGATCAGCCACATGCTCAACAACCCTGAGCTCATGAGGCAGACGATGGAGCTTGCTCGGAATCCAGCCATGATGCAGGAGATGATGCGGAACCAGGACCGGGCCCTAAGCAACCTGGAGAGCATCCCTGGAGGGTATAATGCCCTCCGCCGCATGTACACGGACATCCAGGAGCCCATGTTTAGTGCTGCCCGGGAACAGTTTGGCAACAATCCCTTCTCTTCCCTGGCCGGGAACTCCGACAGCTCATCCTCCCAGCCTCTGCGGACTGAGAATCGAGAGCCCCTCCCTAACCCCTGGAGCCCCTCGCCCCCCACCTCCCAGGCCCCCGGGTCCGGTGGGGAGGGCACCGGAGGATCGGGGACCAGCCAGGTGCACCCGACAGTCTCGAACCCCTTTGGGATCAATGCGGCTAGCCTGGGGTCAGGGATGTTCAACAGCCCGGAAATGCAGGCCCTCCTCCAGCAGATCTCTGAGAACCCCCAGCTGATGCAGAATATGATGGTGAACGTGCCGCTCTTCGCGGGGAACCCCCAGCTGCAGGAGCAGCTCCGCCTGCAGCTCCCAGTCTTCCTGCAGCAGATGCAGAACCCGGAGTCACTCTCCATTCTTACCAATCCCCGAGCCATGCAGGCGCTGCTGCAGATCCAGCAGGGACTGCAGACCTTGCAGACCGAGGCCCCCGGACTGGTACCCAGCCTTGGCTCTTTTGGGATGTCCCGGACCCCAGCCTCCTCTGCAGGCAGCAACGCTGGGTCTGCGCCTGAGGCCCCCACCTCCTTGCCAGCCCCGCCAGCCACATCCTCTCCAACAGGGGCCTCCAGTGCTCAGCAGCAGCTCATGCAGCAGATGATCCAGCTTTTGGCTGGAAGTGGAAACTCACAGGTGCAGACGCCAGAAGTGAGATTTCAGCAGCAGCTGGAGCAGCTCAACTCCATGGGCTTCATCAATCGTGAGGCCAACCTGCAGGCCCTGATCGCCACAGGAGGGGACATCAACGCAGCTATAGAGAGACTCCTGGGCTCTCAGCTGTCCTAA

Related Sequences

bmy_03401T0 SequenceType object (3)

Length: 635 aa      View alignments
>bmy_03401T0
RPGRCGCGWSGGGGEALGRGGERGVLEAPEPSPDGRAGGEKEEPGRAGGRPGGGGGMAEPSGAETRPPIRVTVKTPKDKEEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDPATATASSPSTPDPASAPSTTPASPATSAQPSTSGSATSDTGSGSRRSSGGGTSPGTGEGPPSATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLAGNSDSSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMSRTPASSAGSNAGSAPEAPTSLPAPPATSSPTGASSAQQQLMQQMIQLLAGSGNSQVQTPEVRFQQQLEQLNSMGFINREANLQALIATGGDINAAIERLLGSQLS*