Sequence details bmy_03424 (Coding sequence)

Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BCAN ENSTTRG00000014506 (Bottlenosed dolphin)

Gene Details

brevican

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013753, Bottlenosed dolphin)

Protein Percentage 95.02%
cDNA percentage 96.56%
Ka/Ks Ratio 0.46837 (Ka = 0.0274, Ks = 0.0584)

BCAN ENSBTAG00000015789 (Cow)

Gene Details

brevican core protein isoform 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020965, Cow)

Protein Percentage 93.54%
cDNA percentage 94.36%
Ka/Ks Ratio 0.22228 (Ka = 0.0314, Ks = 0.1413)

BCAN  (Minke Whale)

Gene Details

brevican

External Links

Gene match (Identifier: BACU003932, Minke Whale)

Protein Percentage 98.28%
cDNA percentage 98.55%
Ka/Ks Ratio 0.32905 (Ka = 0.0098, Ks = 0.0298)

Additional orthologs identified in other species via the OPTIC pipeline.

BCAN (Human)   Bcan (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2736 bp    Location:1472433..1486215   Strand:+
Raw sequence 
>bmy_03424
ATGGCCCTACCATCTCTGCCCCTGCTGGCAACCCTGGCTCTGGCCTGGGTCCCTGCGGCCTTATCTGATGCTCTGGAAGGAGACAGCTCAGAGGACCGGGCTTTCCGCGTGCGCATAGCGGGTGACGCGCCGCTGCAGGGCGTGCTGGGCGGCGCCCTCACCATCCCGTGCCACGTTCACTACCTGCGGCCGCCGCCAAGCCGCCGGGCCGCGCAGGGCTCCCCCCGGGTCAAGTGGACCTTCCTGTCCGGCGGCCGGGAGGCCGAGGTGCTAGTGGCGCGGGGGCTACGCGTCAAGGTGAGCGAGGCCTACCGGTTCCGCGTGGCACTGCCTGCCTACCCGGAGTCACTCACCGATGTCTCCCTGGTGCTGAGCGAGCTGCGGCCCAACGACTCGGGCATCTACCGCTGCGAGGTCCAGCACGGCATCGACGACAGCAGCGATGCCGTGGAGGTCAAGGTCAAAGGGGTCGTCTTTCTCTACCGGGAGGGCTCTGCCCGCTATGCTTTCTCCTTCGCTGGGGCCCAGGAGGCCTGTGCCCGCATCGGAGCCCGAATCGCCACTCCGGAGCAGCTCTATGCCGCCTATCTTGGGGGCTATGAACAGTGTGATGCTGGCTGGTTGTCCGACCAGACCGTGAGGTATCCCATCCAGACTCCACGAGAGGCCTGTTATGGAGACATGGATGGCTTCCCTGGGGTCCGGAACTATGGAGTGGTGGACCCGGATGACCTCTATGATGTCTACTGTTATGCTGAAGAACTAAATGACAAGCTGACATTGGAGGAGGCACGGGCGTACTGCCAGGAGCGGGGTGCTAAGATTGCAACCACGGGCCAGCTGTATGCAGCCTGGGATGGTGGCCTGGACCGCTGCAGCCCAGGCTGGCTGGCTGATGGCAGTGTGCGCTACCCCATCGTCACACCCAGCCAGCGCTGTGGTGGGGGCCTCCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCAGACCGGCTTCCCCAACAAGCACAGCCGCTTCAATGTCTACTGCTTCCGAGACTCTGCCCAGCCCTCTGCCATCCCTGAGGCCTCCAACCCAGCCTCTGACCTGGCCTCTGATGCACTGGAAGCCATTGTCACAGTGACAGAGACCCTGGAGGAACTGCAGCTGCCTCAGGAAGCTGTGGAGAGCGAGTCCCGGGGAGCCATCTACTCCATTCCCATTATGGAGGATGGAGCAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACCCTCCTAGAATTTGAAACCCAATCCATTGTACCTCCCCTGGGGTCCTCAGAAGAGGAAAGCAAGGTGTTGGAGGAAGAAGAGAAATACCAGGATGAAGAAGAGAAAGAAGAGGAAGACGAAGAGGAGGAGGTGGAGGACGAGGCCCTGTGGGCCTGGCCCAGTGAGCTCAGCAGCTTGGACCCAGAGGCCCCTCTCCCCACTGAGCTGGCTCCAGAGGAGTCACTCTCCCAGGCATCCCCACCAGTGAGGGCAGTCCTGCAGCCTGATGCATCACTACCTCCCTATGGAGAGCCAGAGGCTCCCAGGCCTCCAACGGTCCTTGGACCACCCACTGAGACCCTGCCCACTCCCAGGGAGGGGAACCTGGCATCCCCATCACCTTCCACTCCGGTTGGGGCAAGAGAGAGAGGGGAGGAGACTGGGGGTCCTGAGCTATCTGGGGTCCCTCGAGGAGAGAGTGAGGAGACAGGGAGCTCCGAGGATGCCCCTTCCCTGCTTCCAGCCACACGGGTCCCTGAGGGTACCAGGGATCTGGAGACCCCTTCTGAAGAGAATTCTGGAAGAACTGTCCCAGCAGGGACTTCAGTGCATGCCCAGCCGGTGCTGCCCACTGACAGTGCCAGCCATGGTGGAGTGGCCGTGGCCCCCTCATCAGGTTACTGTGTCCCCAGCCCCTGCCATAATGGTGGGACGTGCTTGGAGGAGGAGGAGGGGGTCCGCTGCCTATGTTTGCCTGGCTATGGGGGGGACCTGTGCGATGTTGGCCTCCGCTTCTGCAGCCCCGGCTGGGACGCCTTCCAGGGCGCCTGCTACAAGCACTTTTCTACACGAAGGAGCTGGGAGGAGGCGGAGAACAAGTGCCGGATGTACGGCGCGCACCTGGCCAGCATCAGCACGCCGGAGGAACAGGACTTCATCAACAGTGGGCTGGGGACAGGGCGGGAGGCGACCCTCGTCACCTATCGATACCGGGAGTACCAGTGGATCGGGCTCAATGACAGGACCATCGAAGGCGATTTCCTGTGGTCAGATGGCGTCCCGCTGCTCTATGAGAACTGGAACCCTGGGCAGCCAGACAGCTACTTCCTGTCCGGAGAGAACTGCGTGGTTATGGTGTGGCACGATCAGGGACAATGGAGTGATGTGCCCTGCAACTACCACCTGTCCTACACCTGCAAGATGGGGCTGGTGTCCTGTGGCCCCCCACCAGAGCTGCCCCTGGCTCGAGTATTTGGCCGTCCACGGCTGCGCTATGAAGTAGACACAGTGCTTCGTTACCGGTGCCGGGAGGGGCTGGCCCAGCGCAACCTACCACTGATCCGCTGCCAGGAGAATGGTCGCTGGGAGCCCCCCCAGATCTCCTGTGCTCGAGCTCTGCGCCCAAYAAAAGCCCCAGAAGGACGTCAGAGGAGGCTCCTGGGGAGCTGGAAGGCACGGTTGACCCCCCCTCCCAATCCAGCTCCAGGTCCCTAA

Related Sequences

bmy_03424T0 Protein

Length: 912 aa      View alignments
>bmy_03424T0
MALPSLPLLATLALAWVPAALSDALEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVHYLRPPPSRRAAQGSPRVKWTFLSGGREAEVLVARGLRVKVSEAYRFRVALPAYPESLTDVSLVLSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFAGAQEACARIGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEELNDKLTLEEARAYCQERGAKIATTGQLYAAWDGGLDRCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPSAIPEASNPASDLASDALEAIVTVTETLEELQLPQEAVESESRGAIYSIPIMEDGAGGSSTPEDPAEAPRTLLEFETQSIVPPLGSSEEESKVLEEEEKYQDEEEKEEEDEEEEVEDEALWAWPSELSSLDPEAPLPTELAPEESLSQASPPVRAVLQPDASLPPYGEPEAPRPPTVLGPPTETLPTPREGNLASPSPSTPVGARERGEETGGPELSGVPRGESEETGSSEDAPSLLPATRVPEGTRDLETPSEENSGRTVPAGTSVHAQPVLPTDSASHGGVAVAPSSGYCVPSPCHNGGTCLEEEEGVRCLCLPGYGGDLCDVGLRFCSPGWDAFQGACYKHFSTRRSWEEAENKCRMYGAHLASISTPEEQDFINSGLGTGREATLVTYRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLARVFGRPRLRYEVDTVLRYRCREGLAQRNLPLIRCQENGRWEPPQISCARALRPXKAPEGRQRRLLGSWKARLTPPPNPAPGP*