Sequence detailsbmy_03425 (Coding sequence)

Part of scaffold_95 (SequenceType object (1))

For more information consult the page for scaffold_95 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NESENSTTRG00000014507 (Bottlenosed dolphin)

Gene Details

nestin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013754, Bottlenosed dolphin)

Protein Percentage 80.31%
cDNA percentage 81.8%
Ka/Ks Ratio 0.42186 (Ka = 0.0252, Ks = 0.0597)

NESENSBTAG00000015794 (Cow)

Gene Details

nestin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020974, Cow)

Protein Percentage 81.99%
cDNA percentage 88.24%
Ka/Ks Ratio 0.5276 (Ka = 0.1066, Ks = 0.2021)

NES (Minke Whale)

Gene Details

nestin

External Links

Gene match (Identifier: BACU003931, Minke Whale)

Protein Percentage 92.51%
cDNA percentage 93.2%
Ka/Ks Ratio 0.47204 (Ka = 0.0108, Ks = 0.0228)

Additional orthologs identified in other species via the OPTIC pipeline.

NES (Human)   Nes (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5058 bp    Location:1503331..1494544   Strand:-
Raw sequence 
>bmy_03425
ATGAATAGCCTCGCTCCCACTCCCGACTCTCAGTCGCTTCAGCTGCTCCTCGCCCCGCCCCGTCATTGTCCCCATCCGTCTCCATTACCCTTCCGTCCTAAAAGCTTTGAGAGCTGCTGGCTTCTCCYGGTGCTCCGCGTCTCTCCACYTTCGGTGGGTCAGACGGGCAGGATGGAGGGCTGCCTGGGGGAGGAATCTTTTCAGATGTGGGAGCTCAACCGGCGCCTGGAGGCCTACCTGGCCCGGGTCAAGGCGCTAGAGGAGCAGAATGAGCTACTCAGCGCGGAGCTCGGGGGTCTCCGGGCACAGGCCGGGGACGCCTCCTGGAGGGCCCGTGCCGACGACGAGCTGGCGGCCCTGCGGGCCCTCGTCGACCAGCGCTGGCGGGAGAAGCGAGCGGCCGAGGTGGCGCGCGACAACCTGGAAGAAGAGGTGGAGGGCGTGGCGAGCCGGTGCCAGCAGCTGCGGCTGGCCCGGGAGCGGACCGCGGAGGAGACGGCCCGCAGCCGGCGCGCGGTCGAGGCCGAAAAGTGCGCCCAGGCCTGGCTGAGCACCCAGGCGGCGGAGCTGGAGCGCGAGCTGGAGTCTCTGCGCGCGGCGCACGAGGAGGAGCGCGCGGGCCTGAACGCTCAGGCTGCCTGCGCCCCCCGCGGCCCCGCTCCGCCCCGCGGGCCCCCCGTGCCGGCCCCCGAGGTGGAGGAGCTGGCGCGGCGGCTGGGCGAGACGTGGCGCGGGGCAGTGCGCGGCTACCAGGAGCGCGTGGCGCACATGGAGACGTCGCTGGGCCAGGCCCGCGAGCGGCTGGGCCACGCGGTGAAGGGCGCCCGCGAGGGTCGCCTGGAGCTGCAGCAGCTCCAAGTGGAGCGCAGCGGCCTCCAGGAGCGCAGGGCCGCGCTGGAGCAGAGGTTGGAGGGCCGCTGGCAGGAGCGGCTGCGGGCTACTGAGCAGTTCCAGCTGGCCGTGGAGGCCCTGGAGCAGGAGAAACAGGGCCTACAGAGCCAGATTGCCCAGGTCCTGGAAGGTCGGCAGCAGCTGGCACACCTCAAGATGTCCCTTAGCCTGGAGGTGGCCACATACAGAACCCTCCTAGAGGCAGAGAACTCCCGGCTGCAGACACCTGGCAGCGGTTCCAAGGCTTCCCTCAGCTTCCTGGACCCTAAGCTGGAGCTGCATTTCCCTGGGACCCCAGAGGGCCGGCGTCTGGGACCTTTGCTCTCTGTCCTGAGCCCTACTCCCCTCTCCTCACCTTTGCCTGATACCCTTGAAACACCTGTGCCAGGCTTTCTGAAGAGCCAGGAACTCCTTCAGGCCCATACCCCCACCTCGGCCAGCACCCCCATTCCACCCACACCTCAGGCTCCCTGCCCTGCCACAGATGCCAAGATCAGAGCCCAGGATGCCCCTCTCTCCCTGCCCCAGCCACGGGTTGGGATGCAACAGGTTCCAGAAGCTGTGTGGGCTGAAGCCAAGGTGGCCACCCCTGCCAGCATCCTGCCAGGACCAGAGGAGCCTGGGGGCAAGCAACAAGAGCCCAGTCCAGGCCAGTCCTCTGAAGATCATGCCTCCCTGGCTCCAGCCCTCAGCCCTGACCATCCCAGTTTAGAGGCCAAAGATGGAGAACCCGGTGGGTCTAGAGAGTCCAGCAGATTCCAGGAGGAAGGGGAAGGACAAATCTGGGGGCTGGCAGAGAAAGAAACAGCTGTAGAGGTCAAAGTAATAAGCAGCTTGCAGCAGGAAACACGTCAAGAAGAGGGGGATCTGGACATGAAAGAAATCCAAGACTCCCCGGGTCCTTTGGAAAAAGAAACTCTGAAGTCTCTGGAAGAGGAGATTCAAGAGCCACTGATTTCTCTGGAAAAACAGCGCCATGAGACAATGAGATCTCTAGAGAAGGAGAATCAGGAATCTCTGAGGTCTTTGGAAGAAGAGAACTTAGAAACACTAAAACCTCTAGAAAAGGAGAATCAAGAGTTATTGCAGTCTTTAGAAGGAAAGGAGATGGAGGTAATGAAACCTCTAGAAAAAGAGACTGTAGAACTACTTAAGCCTATAGGAAAAGAGGACCCACAGACATTGCAATCACTAGAAAAGGAAGGTCAAGAAATAATGAGGTCTSTTCAAGGAAATGTAGAAACATTTTTATATCCAGGAAAGGAAAATCAAGAATTAGTGAGGTCTCTAGAAGAGGAGAACTTTGAGTCATTGAGAGCTCTAGAAAAGGAAAGGCAAGAGCCACTGAGATGTCAAGAAGTAGAGAACCAGGAAACATTGAGACCCTTAGCAAAAGAGAATCAAGAGCCACTGAGATCTCTAGAAGAAAAAGACCAGGAGACATCAAGACCTCTAGGAAAAGAGAATCATGAATCTCTGAGGGCTCCAGAAGATGAGAACCAAGAGACTTTGAGACATCTAGAAAAAGAAAACCAGGAGTCACTGAGATCTCTAGGAGAAGATCAGAAGGCAATGAGACCTCTAGAAGAAGAAGACCAGGAGACATTGAGACCTCTAGAAAAAGAGAATCAGCCACTGAAGTCTCTAGAAAAAGAAGACCAGATGACATTGAGCCCTCTAGAAAAGGTGAAACCAGAGGCACTAAAGTCTCTTGGAAAAGACCAGGAGATAGTTAGACTTCTTGAAAAAGAGAATCAAGACTTATTAAGGTCCCTAAATGAAGAGAGTGTAGAGGCAGTGAGATCTTTAGAAACAGAGACTCTAGAACCACTAAAACCTACAGGAGAAGAAAACCTGGAAATGTTGAAACCTCTAGAAAAGGAAAGTCAAGAACCACTGGGGTCTGTGGAAGGGAACCAAGAGACATTGAGACCCCTAGAAAAGGAGACTCAGAAATCACTGAGCTCTCTGGGAGGGCAGAATGTAGAGACTATGAGATCTCCAGAGGAGGTAGACAAGGGAAGTCAAAGGTATCTGGAAGAGGAAGAGAAAGTGGAGAAGGGAGAGAATCCAGAGCCACCGAGGTCCCTGGAGGAGGAGGGACAGGAGCTGCCACTCTCTGCACATCTGCAGAAGTGGGAAGATACGGTGCAGGGGGGTCAAGAACTGGATCAGGAAACGCCCCCTGGGAGGCCTGAAGTGGACAGTGAGGACGAGGCAGAGATGGAACCTAGGGAACGGGATAGCCTCGCTGGGAAGGGGGAGGCTGTAGAGCAGGGGGAGCTGCAGCTGACGGCCACAGGCAAGGCCTGGAGCCCAGGTGAGGGGCAGCCAGGGAGCCCTGAGCCCAAAGAGCAGAGGGTCTCAGCTGAGGGAGCCAGTGGGGTGGGAGGCACTGAGGGCCTCCAGGACCCTGAAGAGCGGCCAGAGCAGGTGGGGACCCCGGGCCTCGCAGCTCCCCAGGGAATGTCAGAGGTGATAGAGCCWGTGTTGGAAGGTGAGGATGTGGCCCCCAGGGATGGCCGAGCCTCCCCAGAGGTCACCTTGGGCTTAGAGACTGCAGGAGCGGAACAGGGACGGGAGCAGGAGGCGGTAGGGCTGGAGGACCCAGGCGGCCTGGCCAGAGAGGAGGTGATGGAGCCACCCCTGGGGGAGGAAGGTTTGGAGGCAAAGAGGGTGCAGGGCTTGGAAGGGCCCAGAAAGGAGCTGGAGGAGGCAGCTGCTCCGGAGCCAGAGCTCTCCACACTGCCCAGGAAGAGCAGAGACCCGCTGGAGCCTCCCAGGGGCTGGGAGGAGTCCGAGCCTGAAGCCCCTGAGGAAGCAGAGGAGACGTTCCCTGCTGAGACCCCGTGCTGCGATGGAAGTGATACCCCTCAACCCAGGCCCTTGAGCTCAGAGGGAGCAAAGGAGAATGTCAAACCAGTGCTGGGGCCCCCCAGCCCACAGCCCACTGAGTCCTGCTCACCCACCCCAATCCCTGAAGATGCCCCTGGGCCCCAGCCCCTGGCTGAGGGGAGCCAAGAGGCTAGCTGGGGGCTGGCAGGCAGGGCTGAGGTCCTGGGAAAGGTGGGGGGGGAGCAGGAGGATTTGGGCTCTGGGGGAATCCCTGAAGGCCTCCAGGAGGAGGGGGAGGAGAGCAGAGAAGAGAGTGAGGCTGATGAGCTAGGGGAGACCCTTCCCGACTCCACTCCCCTGGGCCTCTACCTCAGGTCCCCTGCTTCTCCCAAGTGGGACCTGGCTGGAGAGCAGAGGCCCTCCCCTCAAGAGGAGACTGGAAAGGAAGGCTGGGGTCCTGCAGTCCTGGCCTCTGAGGACCTTGGGGCCCATCCCTCAGAGGAGGAGGAGGGGGGAGATGAGGAGGAGGAACGTGGCCATGACTCTGAGCTGTCGGAAGAATTTGAGGACTTGGGGACTGAGGCTTCTCTTCTTCCTGGGGTCCCTGGGGAGGTGGCAGAACCTCTGGGCCAGGTGCCCCAGCTGCTACTGGAGCCTGCAGCCTGGGATCGGGATGGGGAATCTGATGGATTTGCAGATGAGGAAGAGAGTGGGGAGGAGGGAGAGGAAGAAGATGAAGAAGAGGCGAGAGAGCCAGGGGCAGGGCAGTGGGGGGCAGGGCCCTCGGTGGGCAGCCTCCCGGCCCTGAGTGGCCCTCAGAGAGGGAACCTCCAGGGGTCTGAGACCATGGATGTCAGTGTCCCCTGGGATGATGGCTTGAGGGGTGCAGCATCTGACGCCCCCATGACCGCCCTGGAGACTGAGTCCCAGGACAGCACGGAGGCCTCAGGATCAGAGGAAGAGTCTGATGCTATTCCCTTGGAGAGGGAGGGCCAAGTCCCTGGCCCTCTGGGGACCCTCAGTGGGGTGGAGGACACGGGCTTAGAGGTGGGGGACACCCTTGGTGTCAATGGCCAGGGCCCCAGCCTGAAGGAAGAGTTGGAGCATGTGAATGGGGGTGTGGTGAACGGGCTGGAGCAGTCTGAGGGAGTAAGGCAGGGGAAACCAGGGCCCCCTGAGGGCGACCAAGGGAGCCCCTTGGAGGAGGAGGAGGAGGGGGGTGCCCTGAAGACCCCTTGGGCAGGGGCTCCTCTTCACCTGGGCCAAGGCCAGCTCCTGAAGTTCAGTCAGCGAGAAGGAGATGGAGACTCCTGGTCCTCAGGGGAGGACTAG

Related Sequences

bmy_03425T0 SequenceType object (3)

Length: 1686 aa      View alignments
>bmy_03425T0
MNSLAPTPDSQSLQLLLAPPRHCPHPSPLPFRPKSFESCWLLXVLRVSPXSVGQTGRMEGCLGEESFQMWELNRRLEAYLARVKALEEQNELLSAELGGLRAQAGDASWRARADDELAALRALVDQRWREKRAAEVARDNLEEEVEGVASRCQQLRLARERTAEETARSRRAVEAEKCAQAWLSTQAAELERELESLRAAHEEERAGLNAQAACAPRGPAPPRGPPVPAPEVEELARRLGETWRGAVRGYQERVAHMETSLGQARERLGHAVKGAREGRLELQQLQVERSGLQERRAALEQRLEGRWQERLRATEQFQLAVEALEQEKQGLQSQIAQVLEGRQQLAHLKMSLSLEVATYRTLLEAENSRLQTPGSGSKASLSFLDPKLELHFPGTPEGRRLGPLLSVLSPTPLSSPLPDTLETPVPGFLKSQELLQAHTPTSASTPIPPTPQAPCPATDAKIRAQDAPLSLPQPRVGMQQVPEAVWAEAKVATPASILPGPEEPGGKQQEPSPGQSSEDHASLAPALSPDHPSLEAKDGEPGGSRESSRFQEEGEGQIWGLAEKETAVEVKVISSLQQETRQEEGDLDMKEIQDSPGPLEKETLKSLEEEIQEPLISLEKQRHETMRSLEKENQESLRSLEEENLETLKPLEKENQELLQSLEGKEMEVMKPLEKETVELLKPIGKEDPQTLQSLEKEGQEIMRSXQGNVETFLYPGKENQELVRSLEEENFESLRALEKERQEPLRCQEVENQETLRPLAKENQEPLRSLEEKDQETSRPLGKENHESLRAPEDENQETLRHLEKENQESLRSLGEDQKAMRPLEEEDQETLRPLEKENQPLKSLEKEDQMTLSPLEKVKPEALKSLGKDQEIVRLLEKENQDLLRSLNEESVEAVRSLETETLEPLKPTGEENLEMLKPLEKESQEPLGSVEGNQETLRPLEKETQKSLSSLGGQNVETMRSPEEVDKGSQRYLEEEEKVEKGENPEPPRSLEEEGQELPLSAHLQKWEDTVQGGQELDQETPPGRPEVDSEDEAEMEPRERDSLAGKGEAVEQGELQLTATGKAWSPGEGQPGSPEPKEQRVSAEGASGVGGTEGLQDPEERPEQVGTPGLAAPQGMSEVIEPVLEGEDVAPRDGRASPEVTLGLETAGAEQGREQEAVGLEDPGGLAREEVMEPPLGEEGLEAKRVQGLEGPRKELEEAAAPEPELSTLPRKSRDPLEPPRGWEESEPEAPEEAEETFPAETPCCDGSDTPQPRPLSSEGAKENVKPVLGPPSPQPTESCSPTPIPEDAPGPQPLAEGSQEASWGLAGRAEVLGKVGGEQEDLGSGGIPEGLQEEGEESREESEADELGETLPDSTPLGLYLRSPASPKWDLAGEQRPSPQEETGKEGWGPAVLASEDLGAHPSEEEEGGDEEEERGHDSELSEEFEDLGTEASLLPGVPGEVAEPLGQVPQLLLEPAAWDRDGESDGFADEEESGEEGEEEDEEEAREPGAGQWGAGPSVGSLPALSGPQRGNLQGSETMDVSVPWDDGLRGAASDAPMTALETESQDSTEASGSEEESDAIPLEREGQVPGPLGTLSGVEDTGLEVGDTLGVNGQGPSLKEELEHVNGGVVNGLEQSEGVRQGKPGPPEGDQGSPLEEEEEGGALKTPWAGAPLHLGQGQLLKFSQREGDGDSWSSGED*