Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC71 ENSTTRG00000014518 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 71

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013765, Bottlenosed dolphin)

Protein Percentage 94.27%
cDNA percentage 96.65%
Ka/Ks Ratio 0.34157 (Ka = 0.025, Ks = 0.0732)

C3H1ORF92 ENSBTAG00000012348 (Cow)

Gene Details

leucine-rich repeat-containing protein 71

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016383, Cow)

Protein Percentage 93.2%
cDNA percentage 92.78%
Ka/Ks Ratio 0.11094 (Ka = 0.0312, Ks = 0.2813)

LRRC71  (Minke Whale)

Gene Details

leucine rich repeat containing 71

External Links

Gene match (Identifier: BACU003918, Minke Whale)

Protein Percentage 98.39%
cDNA percentage 98.87%
Ka/Ks Ratio 0.22858 (Ka = 0.0068, Ks = 0.0298)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1848 bp    Location:1705714..1718091   Strand:+
>bmy_03435
ATGTCGGGCGAGGCGAGCGCACCACCGGTGGCCTCACCCAGGGCCCCGCGTCCCGGGGTCCAGAAGTCATCCAGTGCCGTGACCAGGAAGGGGGACCGCGGGGCCAAGGAGAAGCCGACGACCGTCCTGCCGCCGGTGGGGGAGGAGGAACCCAAAAACCCTGAGGAGTACCAGGGCACCGGCGTCCTCGAGGTGGACTTCGCTGAGCTCTGCACGCGGTGGGGCTACACGGACTTCCCCAAAGTGGTCACCCGGCCCCGCCCGCACCCGACCTTCGTCCCCTCCGCCTCTACGTCGGAAAAGCCCACCGTAGACGAACAGCGGCTGTCCGGGTCCTGCAGCCTCAACAGCCTGGAGAGCAAATACGAGTTCTTCCGGCCCACCATCCAGGTGGAGCTGGAGCCCGAGGACAAGTCCGTGAAGGAAATCTACATCCGCGGTGAGGTCCGCCCCCGGTCCCTCTCACCCGTCCACCACCGCACCCCTCCGGGCCTGAGGCGCCGTCCTCCTTTCCCTTCCGCAGGTTGGAAGGTTGAGGAGCGGATCCTGGGTATCTTCTCTAAGTGTCTGACCTCCCTCAGCCAGCTTCAGGCCATCAACTTGTGGAAAGTGGGGCTGACTGATAAGACCCTGACCACCTTTATCGCTCTCCTGCCTCTCTGCTCATCCACGCTCAGGAAGGTGTCTCTGGAGGGGAACCCGCTGCCGGAGCAGTCCTATCACAAGCTCATGGCAGTGGACAGCACGATCGCGCACTTGTCTCTGAGGAACAACAACATCGACGACCACGGGGCGCAGCTCCTAGGCCAGGCTTTGTCCACGCTGCACAGCTGCAACCGGACCCTGGTCTCCCTCAACCTGGGCTTCAACCACATCGGTGACGAGGGCGCGGGCTACATCGCGGACGTGCGTGCGAGGCCGGCAGGGGCCCATGCGCGAGCTGTGGCGGCCCGGGGCCAGCCGGCTCACTGCCCCTCCCTGCCCCCACAGGGCCTCCGGTTCAACCGCTCCCTGCTCTGGCTGTCCCTGGCCCACAACCGCATCCAGGACAAGGGCGCCCTGAAGCTGGCCGAGGTCCTGCGCCCCTTCGAGCTGACGCACACCGAGGTGGTGGAGCGCCGGCGCCTCCTGCTGGAGAAAGGTTTGCAGGAGCGCTCGCGATCGCCTTCCACTTCTCGACATGGGGACTCCAAAACAGAGCGTGAGAAGAATCAGCTGATGGGGGTCAGCAGTTTTGCAATGGTGGAGAAAGACAAGACGCAGACAACGAAGACCCCTAAGGGTCTGGGCAAGAAAAAGGAAAAGTCCGGGGAAGTGGTGAAGAAAGAGGAGAAGTCAGGGTCTGGGCAGTTACCCACACAAGGAACCCCTAAGAAAGAAGACTCCACAAAGGCAGGCAAGGGGAAGGTAACCATCCCTGAGCAGAAGCTAAGCAAGGGAAAAGGGACCAAGACTGGGAGCAAAGAGAAGCGCAGCATCCTCCTGGAGTCGGAGCTGGTTGGGGAAACTACTGAGATGGTCAACCCTCTCCTGGAGCCCGTGGAGCACCGAGATGGGAAAGTTTTCATGCCTGGGAACAAGGTCCTTTTGCATCTCAACCTTCTCCGAAACCGCATCACGGAGGTGGGGCTAGAGGCCTTCCTCACCGCAGTGCAATACCAGGCACAGTTCTCCAAGTCCAAGAGCGCGTCCAAGGGCCCCGTGGGGCTGCTGTGGCTGTCCCTGGCGAAAAACTGCTTCTCCCCACAATGTCCTGCGTACACCACGATCCAAGAGCTGATGCTGCCAAGGGACCCTGTCAGTAAAGCCAAGCACAAAGAGGCGGCGGCTGTGGCTTCCTCCACCTAG

Related Sequences

bmy_03435T0 Protein

Length: 616 aa      View alignments
>bmy_03435T0
MSGEASAPPVASPRAPRPGVQKSSSAVTRKGDRGAKEKPTTVLPPVGEEEPKNPEEYQGTGVLEVDFAELCTRWGYTDFPKVVTRPRPHPTFVPSASTSEKPTVDEQRLSGSCSLNSLESKYEFFRPTIQVELEPEDKSVKEIYIRGEVRPRSLSPVHHRTPPGLRRRPPFPSAGWKVEERILGIFSKCLTSLSQLQAINLWKVGLTDKTLTTFIALLPLCSSTLRKVSLEGNPLPEQSYHKLMAVDSTIAHLSLRNNNIDDHGAQLLGQALSTLHSCNRTLVSLNLGFNHIGDEGAGYIADVRARPAGAHARAVAARGQPAHCPSLPPQGLRFNRSLLWLSLAHNRIQDKGALKLAEVLRPFELTHTEVVERRRLLLEKGLQERSRSPSTSRHGDSKTEREKNQLMGVSSFAMVEKDKTQTTKTPKGLGKKKEKSGEVVKKEEKSGSGQLPTQGTPKKEDSTKAGKGKVTIPEQKLSKGKGTKTGSKEKRSILLESELVGETTEMVNPLLEPVEHRDGKVFMPGNKVLLHLNLLRNRITEVGLEAFLTAVQYQAQFSKSKSASKGPVGLLWLSLAKNCFSPQCPAYTTIQELMLPRDPVSKAKHKEAAAVASST*