Sequence detailsbmy_03477 (Coding sequence)

Part of scaffold_101 (SequenceType object (1))

For more information consult the page for scaffold_101 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNW1ENSTTRG00000009330 (Bottlenosed dolphin)

Gene Details

SNW domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008847, Bottlenosed dolphin)

Protein Percentage 99.81%
cDNA percentage 99.07%
Ka/Ks Ratio 0.02434 (Ka = 0.0008, Ks = 0.0342)

SNW1ENSBTAG00000008136 (Cow)

Gene Details

SNW domain-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010697, Cow)

Protein Percentage 99.81%
cDNA percentage 96.89%
Ka/Ks Ratio 0.00614 (Ka = 0.0008, Ks = 0.1354)

SNW1 (Minke Whale)

Gene Details

SNW domain containing 1

External Links

Gene match (Identifier: BACU010851, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.32%
Ka/Ks Ratio 0.09483 (Ka = 0.0017, Ks = 0.0183)

Additional orthologs identified in other species via the OPTIC pipeline.

SNW1 (Human)   Snw1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1779 bp    Location:184133..229925   Strand:+
Raw sequence 
>bmy_03477
CCGGTTAGAAGAGAACCGAATTGTAGTCTTGTTCAAAGAACTACAAATCCCAGAAGGCCAGTCGGCTGGGGGCGCCTGCGCACCGCTCGCTCCTTCCTTTCCCCAACTCTCTGCCGGGAAAGACCCGCCCCGCGGTGCTGTCGCTCGCGCTGGAAGAAGCGGAAGAAGATGGCGCTCACCAGCTTTTTACCTGCACCTACTCAGCTATCTCAGGACCAGCTTGAGGCTGAAGAAAAAGCAAGATCGCAGAGATCACGACAGACCTCACTGGTCTCCTCCCGAAGAGAACCTCCCCCATACGGGTACCGGAAAGGCTGGATACCTCGGTTATTAGAGGATTTTGGAGATGGAGGTGCTTTTCCAGAGATCCACGTGGCCCAGTATCCCCTGGATATGGGACGAAAGAAAAAAATGTCAAATGCACTGGCCATTCAGGTGGATGCTGAAGGAAAAATTAAGTATGATGCAATTGCTCGACAGGGACAGTCAAAAGACAAGGTCATTTATAGCAAGTACACTGACCTGGTTCCCAAAGAAGTCATGAATGCAGATGACCCAGACCTGCAAAGACCTGATGAAGAAGCCATTAAAGAGATAACAGAAAAGACAAGGGTAGCCTTAGAAAAATCCGTATCGCAGAAGGTTGCTGCGGCCATGCCAGTCCGAGCAGCTGATAAACTGGCTCCTGCTCAGTATATCCGATACACACCATCTCAACAAGGAGTGGCTTTCAACTCTGGAGCTAAACAGAGAGTTATTCGAATGGTGGAAATGCAGAAAGATCCGATGGAGCCCCCAAGGTTCAAGATTAATAAGAAAATTCCCCGGGGACCACCTTCTCCTCCTGCACCTGTCATGCATTCTCCTAGCCGAAAGATGACCGTGAAGGAACAACAAGAGTGGAAGATTCCTCCCTGTATTTCAAACTGGAAAAATGCAAAGGGTTATACAATTCCATTAGATAAACGTYTGGCAGCTGATGGAAGAGGACTGCAGACAGTCCACATCAATGAAAATTTTGCAAAACTGGCCGAAGCCCTCTACATTGCTGATCGGAAGGCTCGTGAAGCTGTGGAAATGCGTGCTCAAGTAGAGAGAAAGATGGCTCAAAAAGAAAAGGAGAAACATGAAGAGAAACTTAGAGAAATGGCCCAGAAAGCCAGGGAGAGAAGAGCTGGGATCAAAACCCATGTGGAAAAAGAGGATGGGGAGGCACGTGAGAGGGATGAAATCCGGCATGACAGGCGAAAAGAGAGACAGCATGACCGGAATCTTTCCAGGGCAGCTCCAGATAAGAGGTCGAAACTGCAGAGAAATGAAAATCGAGATATCAGTGAAGTCATTGCTCTTGGTGTGCCCAATCCTCGGACTTCCAATGACGTTCAGTATGACCAAAGGCTCTTCAACCAATCCAAGGGTATGGACAGTGGTTTTGCAGGTGGAGAAGATGAAATTTACAATGTTTATGATCAAGCCTGGAGAGGTGGTAAAGATATGGCCCAGAATATTTACAGGCCCAGTAAAAATCTGGACAAGGACATGTATGGTGATGACCTAGAAGCCAGAATAAAGACTAACAGATTTGTTCCCGATAAGGAGTTTTCTGGTTCAGACCGTAGACAAAGAGGCCGAGAAGGACCAGTTCAGTTTGAGGAGGATCCTTTTGGTTTGGACAAATTTTTGGAAGAAGCCAAACAGCACGGTGGCTCTAAAAGACCCTCAGATAGCAGCCGCCCCAAGGAACATGAGCATGAAGGCAAGAAGAGGAGAAAGGAGTAG

Related Sequences

bmy_03477T0 SequenceType object (3)

Length: 593 aa      View alignments
>bmy_03477T0
PVRREPNCSLVQRTTNPRRPVGWGRLRTARSFLSPTLCRERPAPRCCRSRWKKRKKMALTSFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNDVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE*