Part of scaffold_101 (Scaffold)

For more information consult the page for scaffold_101 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VIPAS39 ENSTTRG00000012203 (Bottlenosed dolphin)

Gene Details

VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011573, Bottlenosed dolphin)

Protein Percentage 98.98%
cDNA percentage 98.58%
Ka/Ks Ratio 0.10866 (Ka = 0.0047, Ks = 0.0428)

SPE39 ENSBTAG00000020475 (Cow)

Gene Details

Spermatogenesis-defective protein 39 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027283, Cow)

Protein Percentage 97.09%
cDNA percentage 95.01%
Ka/Ks Ratio 0.07191 (Ka = 0.0132, Ks = 0.1834)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1479 bp    Location:450498..471934   Strand:+
>bmy_03487
ATGAATCGGACAAAGGGTGATGAGGAGGAGTATTGGAATAGCTCCAAGTTCAAGGCTTTCACCTTTGATGACGATGATGATGAGCTCTCACAGTTAAAGGAATCCAAGCGGGCAGTGAATAGCCTTCGAGACTTCGTGGATGATGATGATGACGATGACCTGGAGAGAGTCAGCTGGAGCGGGGAACCTGTGGGAAGTATCTCATGGTCCATCAAAGAGACTGCTAGTAATAGTGGGTCAAACCATGAGCGTGAACAGCTGAAGAACCGAAACAGCTTCTCCTCCTATGCACAACTACCCAAACCTGCTTCTACCTACTCCCTGAGCAGCTTTTTTAGAGGGAGAACTAGACCTGGAAGTTTCCAGTCCCTCTCTGATGCTCTGTCGGACACACCTGCCAAGAGCTATGCTCCAGAGCTAGGGAGACCCAAGGGGGAGTATCGGGATTACAGCAATGATTGGAGCCCCAGTGACACAGTGCGACGCCTTCGGAAGGGCAAGGTCTGCTCCCTGGAAAGATTCCGCTCCTTACAGGACAAGCTACAACTCCTAGAAGAAGCAGTAAGCATGCATGATGGAAACGTCATTACTGCAGTTCTGATCTTCCTGAAGAGGACATTGAGCAAAGAGATCCTCTTCCGAGAGCTGGAGGTGCGGCAGGTTGCCCTGAGACATCTCATTCACTTCCTTAAGGAGATAGGGGACCAAAAGCTGCTTTTAGACCTCTTTAGGTTCCTAGATAGAACAGAAGAGCTTGCGCTAACCCATTATCGAGAGCATTTGAACATTCAGGACCCCGAGAAACGAAAAGAATTTCTTAAGACCTGCATTGGTTTGCCATTTTCAGCAGAAGATTCTGCACACATACAAGACCATTACACGCTCCTGGAACGTCAGATCATTATCGAGGCAAATGATCGACATCTAGAATCAGCAGGACAGACTGAAATCTTCCGGAAGCACCCCCGCAAAGCTTCTATCCTCAACATGCCGTTAGTGACGACGCTTTTCTACTCCTGCTTCTACCACTACACAGAGGCTGAGGGCACATTCAGCAGTCCGGTCAACCTGAAGAAGACATTTAAGATCCCAGACAAACAGTATGTGCTGACAGCCCTGGCTGCTCGCGCCAAGCTTCGGGCCTGGCATGATGTCGATGCCCTCTTTACCACAAAGAACTGGCTGGGCTATACTAAGAAGAGAGCACCCATTGGCTTCCATCGGGTTGTGGAAATTTTGCACAAGAACAGTGCCCCTGTCCAGATATTACAGGAGTATGTCAATCTGGTGGAAGATGTAGACACAAAGTTGAACTTAGCCACCAAGTTCAAGTGTCATGATGTCGTCATTGATACTTGCCGGGACCTGAAGGATCGTCAGCAGTTGCTCGCGTACAGGAGCAAGGTGGATAAAGGATCTGCCGAGGAGGAGAAGATTGATGCCATTCTCAGCAGCTCGCAAATTCGATGGAAGAATTAA

Related Sequences

bmy_03487T0 Protein

Length: 493 aa      View alignments
>bmy_03487T0
MNRTKGDEEEYWNSSKFKAFTFDDDDDELSQLKESKRAVNSLRDFVDDDDDDDLERVSWSGEPVGSISWSIKETASNSGSNHEREQLKNRNSFSSYAQLPKPASTYSLSSFFRGRTRPGSFQSLSDALSDTPAKSYAPELGRPKGEYRDYSNDWSPSDTVRRLRKGKVCSLERFRSLQDKLQLLEEAVSMHDGNVITAVLIFLKRTLSKEILFRELEVRQVALRHLIHFLKEIGDQKLLLDLFRFLDRTEELALTHYREHLNIQDPEKRKEFLKTCIGLPFSAEDSAHIQDHYTLLERQIIIEANDRHLESAGQTEIFRKHPRKASILNMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWHDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNSAPVQILQEYVNLVEDVDTKLNLATKFKCHDVVIDTCRDLKDRQQLLAYRSKVDKGSAEEEKIDAILSSSQIRWKN*