Part of scaffold_102 (Scaffold)

For more information consult the page for scaffold_102 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTRH2 ENSTTRG00000017211 (Bottlenosed dolphin)

Gene Details

peptidyl-tRNA hydrolase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016314, Bottlenosed dolphin)

Protein Percentage 92.74%
cDNA percentage 96.28%
Ka/Ks Ratio 0.75313 (Ka = 0.0356, Ks = 0.0473)

PTRH2 ENSBTAG00000016710 (Cow)

Gene Details

Peptidyl-tRNA hydrolase 2, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022212, Cow)

Protein Percentage 91.06%
cDNA percentage 92.36%
Ka/Ks Ratio 0.3133 (Ka = 0.0503, Ks = 0.1606)

PTRH2  (Minke Whale)

Gene Details

peptidyl-tRNA hydrolase 2

External Links

Gene match (Identifier: BACU020547, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.44%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0202)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 717 bp    Location:740591..751667   Strand:+
>bmy_03527
ATGACTGTTCTCTTCGCGGTTCTTGATCCGGAACTTGTTGTCAAGGAACCCCGGAAGCGTCTGGTTGTTAGATTATCAGAGAGAAGTCCTGCTGATATATCCTTTAGGCATCTTGGTAAAACAGAACATTTCCTTTCTCCACAAGACTTAGCAAAAATTGAGGAACGGCGCTTTGTTATGCTCTCCAAACCCTTGGTTATGGAATATTTGACTAATCCTGGTGCACTCAGCTTGGCTGCCGGAGTTGCTTGTGGCATGTGCCTGGGCTGGGGACTCCGAGTACGCTTTGGAATGATCCCCAAGAGCTCGGTGAGCGAGACAGACACTGACACCAGAACAGAAGCAAGCATCTTAGGAGAGGGTGGGGAGTACAAAATGATTCTGGTGGTTCGAAATGACTTAAAGATGGGAAAAGGGAAAGTGGCTGCCCAGTGCTCTCATGCTGCTGTTTCTGCCTACAAGCAAATTCAAAGGAGAAACCCTGAGTTACTCAAACAGTGGGAATACTGTGGCCAGCCCAAAGTGGTGGTCAGAGCTCCTGATGAAGAAACTCTAGTTGAATTATTGACCCATGCAAAAATGCTGGGACTGACTGTAAGTTTAATCCAAGATGCAGGACGTACTCAGATTGTACCAGGCTCTCGAACTGTTCTAGGAATTGGGCCAGGACCAGTAGACCTAATTGACAAGGTCACTGGTCACCTAAAACTTTACTAG

Related Sequences

bmy_03527T0 Protein

Length: 239 aa      View alignments
>bmy_03527T0
MTVLFAVLDPELVVKEPRKRLVVRLSERSPADISFRHLGKTEHFLSPQDLAKIEERRFVMLSKPLVMEYLTNPGALSLAAGVACGMCLGWGLRVRFGMIPKSSVSETDTDTRTEASILGEGGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKQWEYCGQPKVVVRAPDEETLVELLTHAKMLGLTVSLIQDAGRTQIVPGSRTVLGIGPGPVDLIDKVTGHLKLY*