Sequence details bmy_03528 (Coding sequence)

Part of scaffold_102 (Scaffold)

For more information consult the page for scaffold_102 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLTC ENSTTRG00000017208 (Bottlenosed dolphin)

Gene Details

clathrin, heavy chain (Hc)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016312, Bottlenosed dolphin)

Protein Percentage 93.54%
cDNA percentage 93.01%
Ka/Ks Ratio 0.03322 (Ka = 0.0009, Ks = 0.0275)

BT.44506 ENSBTAG00000016708 (Cow)

Gene Details

clathrin heavy chain 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022210, Cow)

Protein Percentage 98.4%
cDNA percentage 95.13%
Ka/Ks Ratio 0.06505 (Ka = 0.0117, Ks = 0.1793)

Additional orthologs identified in other species via the OPTIC pipeline.

CLTC (Human)   Cltc (Mouse)  

Genome Location

Sequence Coding sequence

Length: 4977 bp    Location:815287..754847   Strand:-
Raw sequence 
>bmy_03528
ATGGCCCAGATTCTGCCAATTCGTTTTCAGGAGCATCTTCAGGTGCGGTGGGCCCGAGCTAGTGAGGGCTGTGGAGAGAGGGAGCTCCAGAACCTGGGTATAAACCCAGCAAACATCGGCTTCAGTACCCTGACTATGGAGTCAGACAAATTCATCTGCATTAGAGAGAAAGTAGGGGAGCAGGCCCAGGTGGTAATTATTGATATGAATGACCCAAGTAATCCAATTCGAAGACCAATTTCAGCAGACAGCGCCATCATGAATCCAGCCAGCAAAGTAATTGCACTAAAAGCTGGGAAAACTCTTCAGATATTTAACATTGAAATGAAAAGTAAAATGAAGGCCCATACCATGACCGATGATGTCACCTTCTGGAAATGGATCTCTTTGAATACGGTTGCTCTTGTTACGGATAATGCAGTTTATCATTGGAGTATGGAAGGAGAGTCTCAGCCAGTGAAAATGTTTGATCGCCATTCTAGCCTTGCAGGGTGCCAGATTATCAATTATCGTACTGATGCAAAGCAAAAGTGGTTACTTCTGACTGGCATATCTGCACAGCAAAATCGTGTGGTAGGAGCTATGCAGTTATATTCTGTAGATAGGAAAGTGTCTCAGCCCATTGAAGGACATGCGGCTAGCTTCGCACAGTTTAAGATGGAAGGAAATGCAGAAGAGTCGACGTTATTTTGTTTTGCAGTACGGGGTCAAGCCGGAGGGAAGATCAGTGAAAAGCATGACGTAGTATTCTTGATTACTAAGTATGGTTATATCCACCTGTATGATCTTGAGACTGGTACCTGCATCTACATGAATAGAATCAGTGGAGAAACAATCTTTGTCACTGCACCTCATGAAGCCACAGCTGGAATAATTGGAGTAAACAGAAAGGGACAAGTTCTCTCAGTATGTGTGGAAGAAGAAAACATAATTCCTTATATCACCAATGTCCTACAAAATCCTGATTTGGCCCTGAGAATGGCTGTACGTAACAACTTGGCTGGTGCTGAAGAACTCTTTGCCAGGAAATTTAATGCTCTTTTTGCCCAGGGAAATTACTCAGAGGCAGCAAAGGTGGCTGCTAATGCACCAAAGGGAATCCTTCGTACCCCAGACACCATCCGTCGGTTCCAGAGTGTCCCAGCTCAGCCAGGTCAAACTTCTCCCCTACTTCAGTACTTTGGAATCCTTTTGGACCAGGGCCAGCTAAACAAATATGAATCCTTAGAACTGTGTAGGCCTGTACTTCAGCAAGGGCGGAAACAGCTTTTGGAGAAATGGTTAAAAGAAGATAAGCTGGAATGCTCTGAAGAACTGGGAGACCTTGTGAAATCCGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAATGTGCCAAATAAAGTCATTCAGTGCTTTGCAGAAACAGGTCAAGTCCAGAAGATTGTTTTATATGCTAAAAAAGTTGGATATACTCCAGACTGGATCTTTCTGCTGAGAAATGTTATGCGAATCAGTCCAGATCAGGGGCAGCAGTTTGCTCAAATGTTAGTTCAGGATGAAGAACCTCTTGCTGATATCACACAGATTGTCGATGTGTTTATGGAATACAATCTAATTCAGCAGTGTACTGCATTCTTGCTTGATGCACTGAAGAATAATCGCCCATCTGAAGGTCCTTTACAGACAAGGTTGCTTGAGATGAACCTTATGCATGCACCTCAAGTCGCAGATGCTATTCTAGGGAATCAGATGTTCACGCATTATGACCGGGCTCATATCGCTCAGCTGTGTGAGAAGGCTGGCCTCCTGCAGCGTGCATTAGAACACTTCACTGACTTATATGATATAAAGCGTGCGGTTGTTCATACCCATCTTCTTAACCCTGAGTGGTTAGTGAATTACTTTGGGTCCTTATCAGTAGAAGACTCCCTGGAATGCCTCAGAGCCATGCTATCTGCCAATATTCGTCAGAATCTACAGATCTGTGTGCAAGTGGCTTCTAAGTATCACGAACAACTGTCCACTCAGTCTCTGATTGAACTTTTTGAATCTTTCAAGAGTTTTGAAGGTCTTTTTTATTTTCTGGGATCCATTGTTAACTTTAGTCAGGACCCAGATGTGCACTTTAAATATATTCAGGCAGCTTGCAAGACGGGGCAGATCAAAGAAGTAGAAAGAATCTGCAGAGAAAGCAACTGCTATGATCCTGAGCGAGTCAAGAATTTTCTCAAGGAAGCGAAGCTAACAGATCAGTTACCACTTATCATTGTGTGTGATCGATTTGACTTTGTCCATGATTTGGTGCTCTATTTATATAGAAATAATCTTCAAAAGTATATAGAGATATATGTACAGAAGGTGAATCCAAGTCGACTTCCTGTGGTTATTGGAGGATTACTTGATGTTGATTGCTCTGAAGATGTCATTAAAAACTTGATTCTTGTTGTAAGAGGTCAATTCTCTACTGATGAGCTTGTCGCTGAGGTTGAAAAAAGAAACAGATTGAAACTGCTTCTGCCTTGGCTGGAGGCTAGAATTCATGAGGGCTGTGAAGAGCCTGCTACTCACAATGCTTTAGCCAAAATCTACATAGACAGTAATAACAACCCAGAGCGATTTCTTCGGGAAAATCCTTATTATGACAGTCGTGTTGTTGGAAAGTATTGTGAGAAGAGAGATCCACATCTAGCCTGTGTTGCTTATGAACGTGGCCAGTGTGATCTGGAACTTATTAATGTTTGCAATGAGAATTCCCTCTTCAAAAGTCTTTCCCGCTATCTGGTACGGCGAAAGGATCCAGAACTGTGGGGTAGTGTGCTGCTGGAAAGCAATCCTTACAGGAGACCCCTCATTGATCAGGTTGTACAGACAGCCTTGTCTGAGACTCAGGACCCTGAAGAAGTGTCAGTAACTGTCAAGGCTTTTATGACTGCAGACCTTCCTAATGAACTCATTGAACTGCTGGAGAAAATTGTCCTTGATAACTCTGTATTCAGTGAACACAGGAATCTGCAAAACCTCCTCATCCTCACTGCAATCAAGGCTGACCGTACCCGTGTTATGGAATATATTAACCGCCTGGATAATTATGATGCCCCAGATATTGCCAATATCGCCATCAGCAATGAGCTGTTTGAAGAAGCATTTGCCATTTTTCGGAAATTTGACGTCAATACTTCAGCAGTGCAGGTCTTGATCGAACATATTGGAAACTTAGATCGGGCATATGAGTTTGCTGAACGCTGCAATGAACCTGCAGTCTGGAGTCAGCTCGCAAAAGCCCAGCTGCAGAAAGGAATGGTGAAAGAAGCCATTGATTCTTACATCAAAGCAGATGATCCTTCATCCTACATGGAAGTTGTTCAGGCTGCCAATACTAGTGGAAACTGGGAAGAACTGGTGAAGTACTTGCAGATGGCTCGTAAGAAGGCTCGTGAATCCTATGTGGAGACAGAATTGATATTTGCACTGGCTAAAACAAACCGCCTTGCAGAGTTAGAAGAGTTCATCAATGGGCCAAATAACGCTCATATCCAGCAAGTTGGTGACCGCTGTTATGATGAAAAAATGTATGATGCTGCTAAGTTGTTGTACAATAATGTTTCCAATTTTGGACGCTTGGCATCTACTCTGGTTCACCTGGGTGAATATCAGGCAGCTGTTGATGGAGCTAGGAAAGCTAACAGTACTCGAACATGGAAAGAGGTCTGCTTTGCCTGTGTAGATGGGAAAGAGTTCCGTCTCGCTCAAATGTGTGGGCTTCATATTGTAGTACATGCAGATGAATTGGAGGAACTTATCAACTACTATCAGGATCGTGGATATTTTGAAGAGCTGATAACCATGTTGGAAGCAGCACTGGGACTTGAGCGAGCTCATATGGGGATGTTCACCGAGTTAGCTATTCTGTATTCTAAGTTTAAGCCACAGAAAATGAGGGAGCACCTGGAGCTGTTCTGGTCCAGAGTGAACATTCCTAAGGTGCTAAGAGCTGCAGAACAAGCTCACCTTTGGGCAGAATTGGTGTTTTTGTATGACAAGTACGAAGAATATGATAATGCCATAATTACCATGATGAATCATCCGACTGATGCGTGGAAAGAAGGGCAGTTCAAAGATATCATTACCAAGGTTGCCAATGTGGAACTGTACTACAGAGCAATACAGTTCTACTTAGAATTCAAGCCACTGTTGTTAAATGATTTGCTGATGGTGCTGTCTCCACGGTTGGATCATACTCGTGCAGTCAATTATTTCAGCAAGGTTAAACAGCTACCACTGGTGAAACCATATTTGCGTTCAGTCCAGAACCACAACAACAAATCTGTGAATGAATCACTGAACAACCTCTTTATTACAGAAGAAGATTATCAGGCTCTGCGAACATCGATAGATGCTTATGACAACTTTGACAATATCTCGCTTGCTCAGCGTTTGGAAAAACATGAACTCATTGAATTCAGAAGAATTGCTGCTTATCTCTTCAAAGGCAACAATCGCTGGAAACAGAGTGTGGAGCTGTGCAAGAAAGATAGCCTGTACAAGGATGCAATGCAGTATGCCTCTGAATCTAAAGATACTGAGTTGGCTGAAGAACTCCTACAGTGGTTTTTGCAGGAAGAAAAAAGAGAGTGCTTTGGAGCTTGTCTCTTCACTTGTTACGATCTTTTAAGGCCAGATGTTGTCCTGGAAACTGCATGGAGGCACAATATCATGGATTTTGCCATGCCCTATTTCATCCAGGTCATGAAGGAATACTTGACAAAGGTTGATGCAATAAAGGAAAAGGTGGATAAATTAGATGCTTCAGAATCACTGAGAAAAGAAGAAGAACAAGCTACAGAGACTCAACCTATTGTTTATGGTCAGCCCCAGTTGATGCTGACAGCAGGACCCAGTGTTGCAGTCCCTCCCCAGGCACCTTTTGGTTATGGTTATACTGCACCACCCTATGGGCAGCCACAGCCTGGCTTTGGGTACAGCATGTGA

Related Sequences

bmy_03528T0 Protein

Length: 1659 aa      View alignments
>bmy_03528T0
MAQILPIRFQEHLQVRWARASEGCGERELQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM*