Part of scaffold_102 (Scaffold)

For more information consult the page for scaffold_102 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DHX40 ENSTTRG00000017203 (Bottlenosed dolphin)

Gene Details

DEAH (Asp-Glu-Ala-His) box polypeptide 40

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016308, Bottlenosed dolphin)

Protein Percentage 96.47%
cDNA percentage 96.69%
Ka/Ks Ratio 0.34238 (Ka = 0.0238, Ks = 0.0694)

DHX40 ENSBTAG00000017868 (Cow)

Gene Details

probable ATP-dependent RNA helicase DHX40

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023753, Cow)

Protein Percentage 96.69%
cDNA percentage 94.92%
Ka/Ks Ratio 0.1511 (Ka = 0.023, Ks = 0.1522)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1362 bp    Location:876041..854456   Strand:-
>bmy_03529
ATGTCCCGGTTTCCCGCCGTCGCGGGCAGGGCGCCAAGGCGGCAGGAGGAAGGTGAGCAATCAAGAGACCTCCAAGAAGAGCGGCCTTCGGCAGTTCCCATCGCGGATAGAGAAGATAAAGGATGCACATCACAGGAGGGAGGAACTACTCCAACTTTTCCTATTCAAAAACAAAGAAAAAAGCTTATTCAAGCTGTGAGGGACAATTCATTCCTTATTGTTACTGGAAATACAGGAAGTGGTAAAACAACTCAACTCCCAAAATACCTATATGAAGCAGGGTTTTCACAACATGGTATGATTGGTGTGACTCAACCACGAAAAGTAGCTGCCATATCTGTTGCTCAGAGGGTTGCTGAAGAAATGAAATGCACTTTGGGATCCAAAGTAGGATACCAAGTTCGTTTTGATGATTGCAGCTCTAAGGAAACAGCAATCAAATACATGACTGATGGATGTTTACTGAAATATATTCTGGGAGATCCAAATCTTACCAAGTTCAGCGTCATTATATTGGATGAAGCCCATGAGAGAACTCTAACTACAGACATCTTATTTGGTTTATTGAAGAAGCTGTTTCAGGAGAAGTCTCCTAATAGAAAGGAACATTTAAAGGTCGTAGTGATGTCAGCAACTATGGAATTAGCCAAGCTCTCTGCATTCTTTGGAAATTGTCCAATATTTGATATACCTGGAAGGCTTTATCCGGTCAGAGAAAAATTCTGCAATTTGATTGGTCCACGAGATAGAGAAAATACTGCATATATTCAAGCGATTGTGAAAGTGACCATGGATATCCATTTGAATGAAATGGCTGGAGACATCTTGGTTTTTCTGACTGGTCAGTTTGAAATCGAAAAAAGTTGTCTTACACTCCTTCAGTATTTTCTCTTTACATATATTTTAGATCAACAGAGAAGAATATTTTTGCCACCTCCACCTGGAATTAGAAAATGCGTCATATCCACCAATATTTCTGCAACATCTTTGACAATAGATGGAATCAGATATGTGGTAGACGGTGGCTTTGTGAAGCAGTTAAATCACAATCCCAGATTAGGATTGGACATCCTAGAGGTGGTTCCAATTTCAAAGAGTGAGGCCTTACAGCGAAGTGGCCGAGCTGGCAGGACTTCCTCAGGAAAATGCTTTCGCATCTATAGTAAAGATTTTTGGAACCAGTGTATGCCTGACCATGTGATCCCTGAGATTAAGAGAACTAGTTTGACATCTGTAGTTCTGACCTTAAAGTGCCTTGCCATACACGATGTAATAAGGTTTCCCTATTTGGATCCACCTAATGAGAGACTTATTTTGGAAGCTCTTAAACAACTCTACCAGTGTGATGCCATTGACAGGTAA

Related Sequences

bmy_03529T0 Protein

Length: 454 aa      View alignments
>bmy_03529T0
MSRFPAVAGRAPRRQEEGEQSRDLQEERPSAVPIADREDKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKYILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCLTLLQYFLFTYILDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDR*