Part of scaffold_102 (Scaffold)

For more information consult the page for scaffold_102 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GDPD1 ENSTTRG00000017199 (Bottlenosed dolphin)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016301, Bottlenosed dolphin)

Protein Percentage 86.55%
cDNA percentage 87.76%
Ka/Ks Ratio 0.6551 (Ka = 0.1117, Ks = 0.1705)

BT.46878 ENSBTAG00000007176 (Cow)

Gene Details

glycerophosphodiester phosphodiesterase domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045487, Cow)

Protein Percentage 80.56%
cDNA percentage 81.08%
Ka/Ks Ratio 0.51169 (Ka = 0.1848, Ks = 0.3612)

GDPD1  (Minke Whale)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 1

External Links

Gene match (Identifier: BACU014003, Minke Whale)

Protein Percentage 88.36%
cDNA percentage 89.09%
Ka/Ks Ratio 0.58905 (Ka = 0.1044, Ks = 0.1772)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 828 bp    Location:1141644..1118066   Strand:-
>bmy_03531
ATGAGACTTTGGCACAAGGCAGCAAGTGGCCATTGGGTCTTTTGGAGTGGGATTCTGATGGGCTTGGATCATCAGAAGAGACCAAAATGTCATTATTCTTCTTTGTATTTCTTCAGTGCAGTTACAGTTGGAACTGATATGTTGGAATTGGACTGTCATATCACAAAAGATGAAGAAGTTGTAGTGTCACATGATGAGAACCTAAAGAGATCAACTGGAGTCAATGTAAACATCTCTGATCTCAAGTACTGTGAACTCCCACCTTACCTTGGAAAACTGGATGTCTCATTTCAAAAAGTTTTTGAGGCCTTTCCTAACACTCCTATTAACATCGATATCAAAGTCAACAACAATTTGCTGATTAAGAAGGTTTCAGAGTTGGTGAAGCAGTACAGACGAGAACACATAACAGTGTGGGGTAATGCCAGTTATGAAATTGTAGAAAAGTGCTACAAAGAGAATTCAGAAATTCCTATACTCTTCAGTTTACAACGTGTTCTGCTCATTCTTGGCCTGTTCTTCACTGGCCTCTTGCCCTTTGTGCCCATTCGAGAACAGTTTTTTGAAATCCCAATGCCTTCTATCATACTGAAGCTAAAAGAACCACACACCATGTCCAGAAGTCAAAAGTTTCTCATCTGGCTTTCTGATACTCTACTAATGAGAAAAGCTTTGTTCGACCACCTCACTGCCCGAGGCATCCAGGTGTATGTTTGGGTATTAAATGAAGAGCAGGAATACAAAAGAGCTTTTGATTTGGGAGCAACTGGGGTGATGACAGACTATCCAACAAAACTTAAGGATTTTTTACATAATTTTTCAGAATAG

Related Sequences

bmy_03531T0 Protein

Length: 276 aa      View alignments
>bmy_03531T0
MRLWHKAASGHWVFWSGILMGLDHQKRPKCHYSSLYFFSAVTVGTDMLELDCHITKDEEVVVSHDENLKRSTGVNVNISDLKYCELPPYLGKLDVSFQKVFEAFPNTPINIDIKVNNNLLIKKVSELVKQYRREHITVWGNASYEIVEKCYKENSEIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSRSQKFLIWLSDTLLMRKALFDHLTARGIQVYVWVLNEEQEYKRAFDLGATGVMTDYPTKLKDFLHNFSE*