Sequence detailsbmy_03545 (Coding sequence)

Part of scaffold_102 (SequenceType object (1))

For more information consult the page for scaffold_102 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C17orf47ENSTTRG00000017184 (Bottlenosed dolphin)

Gene Details

chromosome 17 open reading frame 47

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016287, Bottlenosed dolphin)

Protein Percentage 90.28%
cDNA percentage 94.8%
Ka/Ks Ratio 0.90797 (Ka = 0.052, Ks = 0.0573)

C17ORF47ENSBTAG00000048278 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000056296, Cow)

Protein Percentage 71.56%
cDNA percentage 83.21%
Ka/Ks Ratio 0.87014 (Ka = 0.1861, Ks = 0.2139)

Additional orthologs identified in other species via the OPTIC pipeline.

C17orf47 (Human)   Gm11492 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2049 bp    Location:1756463..1761790   Strand:+
Raw sequence 
>bmy_03545
ATGGGCTCTACCCACAGAGGCACAATCTATCATATGGTCAAGACAAATAAAGTTGGGTCCAAGGTAGCAGTTTCAGCACAGAAAGGGGCCGAGGTTACTAACACAACCCCTCAGCGAGGACATGCATACGATCTTGCCTCAAGCCAGCGGAGTGGCACGGCCTCCATGATCMCTTCAGCCCATCGAAGATCAGAAGCTGGGCATTCCACCATTCCCCATTTAGCATCAGAGTACCCTCGATCTAGCTCCCCCCACTCAGGGCCAGGCGTCTCTGGAGCACCCAGCTGTCGAACTGAGACCCGATCAAAATCTGAAGCATACCGCCATGCTGTCCAGATGCAGCGGAATGTTAGTACATCCAGAGAGGAAGCAACTAGAAGAGGGGGTGAGAGCAAACCAGGGCGTGATATCAATAATCGCTACTCATTAATTCCAGATGCCAAATCCTCTCGCCGGTTGAGTTTTGTCGACCAGAAAGACAACTTCACAATCTTAGAAGAAGACCCACCCTCCAAGGTCCAGTACCCACAAGGGGTCAGAGTTCCCCATAGGCCTTTGGTTTATCCAAAGGATGAAGCAGTCCAAACTGAGCCCACTCGAAAGAGTTTGACTGCTGCTGATATCAGATCTCCAAGGAGACCCTCTAGCCCAGAACGCAGYGACAGCCGCATCTGTACAGACTCTCGACCAACCCAGAGAAGGATCCCTGGCCAAGAATCTGAAATGGGCTGTCAAAACTCAATTTACACAGAACCTAAGGCCTTGCATAGAAGTATGAACTTGGAATCATCCCTCAGACTCTCCTTCCTTAAAGATTTGGATGGTGGACATAAAGTTTCTATGCGCCCAGAGCCTGAGTCTATCTGCAAGCATTCTGTCTACACCGAAACCAAGTCCTTCCCAAAGGTCTTAATATCATCAGAAGTGGAGCCCAACGTGAAGTCCTCAATCCGAGGAGACAGTGAGGGTGGCCGCAGGGTCACCATCTCCCCCGGGGGACAGTCAGCTTCCCGTGTGACATCTCGAGCCGTGTCTGAGAGCCCCCGCAAATCTTCCACGTTTGTCAGTCCAGAGCCCATCTATAAGCAGCATACCACAAGACCCTCAAAAAGTACTTATGTGTCCTCAGGACCCACACTTAGGCATCCAGAGCCCTCTGGAAAGCCCTCTGTCCATGCAGAACTGGAACTGACCCCTCGGCCCTTACCCCCTCGGTCCTTACCGAGATATGGGCCAGACTCCTCATGGTGGGCCTTACTCAACCCTGAAGTTGAAATGCCCCAAAGCAGGCCAATAACACTTGATTCCGAGCCTAAGTGCCCTTCTCCCATAGACCCTTCAATGCCCTTTTTTGAAATGGAATCAAGCCCTTTCTGTGAGGATCTGATGTTCCAGAGAAGGAAGGCAAGTCCATCACCACCACCACCACCAAAGGAGTCTCCAAGCCCGGAACCACGGAGGGAAGTGCCACAGGTCCCCAAGCACACCTCCAAACAACCCATTCAAAGGTTTAGTGCTTTCTTCTTGGATGTCTCTGAGGAAATGTACAATCGTGTCATCTGGTGGCTAAAAGGTCTGTGCTTTTCCCTCCTGTGGGTCCACTCTGGGGGGCTGGGAGGCAGGAGGACAGTTGGGAGGGTGGCTTCTCTCTCCAGCCTGTTCAGCAGCAGAGCTGCTCCCCAGAAGCTGGGAAGAGAAGACTCCCAGGCAGCGGGGCCTGCTGGTCTTCTCTGGATCTCTGGAAGTGGGTGGCATGGAGGTGGGCCCGGTACTCTCCTCACAGGGTGTGCAAGAGCTAGGCCTTCCTCAGACTGTTCCCTAGGCTGCATGGCCCACAGGCAGTCCCAGGATGAAGACTCTGTGGTGCTGGTGTCCAAGGCCTCTGGTTCCTCTCATCTAGGAATGGTTGACTGTGGAGTCTGGTCCAGATTCCATTCCCGGCAGGAATTCTCTGGTGGCCCAGCCACGGCGCCTGGCTCGTGGATGGCAGCCTGTTTGTCGCTGAGCTTCACAAGCCCTTCTGGGTCCACAGCTGGGGACAGAGCATGA

Related Sequences

bmy_03545T0 SequenceType object (3)

Length: 683 aa      View alignments
>bmy_03545T0
MGSTHRGTIYHMVKTNKVGSKVAVSAQKGAEVTNTTPQRGHAYDLASSQRSGTASMIXSAHRRSEAGHSTIPHLASEYPRSSSPHSGPGVSGAPSCRTETRSKSEAYRHAVQMQRNVSTSREEATRRGGESKPGRDINNRYSLIPDAKSSRRLSFVDQKDNFTILEEDPPSKVQYPQGVRVPHRPLVYPKDEAVQTEPTRKSLTAADIRSPRRPSSPERSDSRICTDSRPTQRRIPGQESEMGCQNSIYTEPKALHRSMNLESSLRLSFLKDLDGGHKVSMRPEPESICKHSVYTETKSFPKVLISSEVEPNVKSSIRGDSEGGRRVTISPGGQSASRVTSRAVSESPRKSSTFVSPEPIYKQHTTRPSKSTYVSSGPTLRHPEPSGKPSVHAELELTPRPLPPRSLPRYGPDSSWWALLNPEVEMPQSRPITLDSEPKCPSPIDPSMPFFEMESSPFCEDLMFQRRKASPSPPPPPKESPSPEPRREVPQVPKHTSKQPIQRFSAFFLDVSEEMYNRVIWWLKGLCFSLLWVHSGGLGGRRTVGRVASLSSLFSSRAAPQKLGREDSQAAGPAGLLWISGSGWHGGGPGTLLTGCARARPSSDCSLGCMAHRQSQDEDSVVLVSKASGSSHLGMVDCGVWSRFHSRQEFSGGPATAPGSWMAACLSLSFTSPSGSTAGDRA*