Part of scaffold_102 (Scaffold)

For more information consult the page for scaffold_102 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF43 ENSTTRG00000006850 (Bottlenosed dolphin)

Gene Details

ring finger protein 43

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006476, Bottlenosed dolphin)

Protein Percentage 64.94%
cDNA percentage 65.98%
Ka/Ks Ratio 0.38267 (Ka = 0.0253, Ks = 0.0661)

RNF43 ENSBTAG00000020119 (Cow)

Gene Details

RING finger protein 43 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026797, Cow)

Protein Percentage 88.56%
cDNA percentage 89.37%
Ka/Ks Ratio 0.17505 (Ka = 0.0581, Ks = 0.3319)

RNF43  (Minke Whale)

Gene Details

ring finger protein 43

External Links

Gene match (Identifier: BACU006258, Minke Whale)

Protein Percentage 97.42%
cDNA percentage 98.66%
Ka/Ks Ratio 0.73713 (Ka = 0.0115, Ks = 0.0156)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2100 bp    Location:1907104..1923600   Strand:+
>bmy_03549
TCCCACCCCCTGTACCTGTGCAACGCCAGCGACGACGACAATCTGGAGCCTGGATTCATCAGCATTGTCAAGCTGGAGAGTCCCCAGCGGGCCCCCCGCCCCTGCCTGTCACTGGCCAGCAAGGCCCGGATGGCGGGGGAGCGGGGAGCCAGCGCCGTCCTCTTTGACATCACGGAGGATCGCGCTGCTGCTGAACAGCTGCAGCAGCCCCTGGGGCTGACGCGGCCAGTGGTGTTGATCTGGGGTAATGATGCCGAGAAGCTGATGGAGTTTGTGTACAAGAACCGAAAGGCCTACGTGAGGATTGAGCTGAAGGAGCCCCCGACGTGGCCAGATTATGACGTGTGGATCCTCCTGACGGTGGTGGGCACCATCTTTGTGGTCATCCTGGCCTCGGTGCTGCGCATCCGGTGCCGCCCCCGTCACAACAGACCGGATCCCCTTCAGCAGCGAACAGCCTGGGCCATCAGCCAGCTGGCCACCAGGAGGTACCAGCCCGGCTGCAGGAGGGCCCGGGCCGAGTGGCCAGATTCAGGTAGCAGCTGCAGTTCAGCCCCTGTGTGCGCCATCTGCCTGGAGGAGTTCTCGGAGGGCCAGGAGCTACGGGTCATTTCCTGCCTCCATGAGTTCCATCGTACCTGTGTGGACCCCTGGCTGCATCAGCATCGCACTTGCCCCCTCTGCATGTTCAACATCGTAGAGGGAGACTCGCTTTCTCAGTCCCTGGGACCGTCTAGATCTTACCAAGAACCAGGCCGAAGACTCCACCTCATTCGCCAGCATCCCGGCCATGCCCACTACCACCTGCCTGCGGCCTACCTGTCGGGCCCTTCCCGGAGTGCAGCGGCTCGGCCCACACGGCCTGGTCCCTTCCTACCATCCCAGGAGCCAGGCGTGGGCCCTCGGCACCACCGCCTCCCCAGAAGCACACATCCCYGGGCTCCAGGCGCGCCACAGCGCCTGGCAGTGGCCCAGAGCCCCTCTGCGCAGGGCTGGGGGCTAAGCAACCTGCGGTGCACTTTGCAGCACCCTGCCACCTGCCCCATGCCCCCACGCCGGGCCAGGCCTCACGACAGCAGCGGGTCTGGAGAAAGCTACTGCACAGAACACAGCGGCTACCTGGCAGACGGGCCAGCCAGTGACTCCAGTTCAGGGCCCTGTCACGGCTCTTCGAGTGACTCAGTGGTCAACTGCACGGACATCAGCCTGCAGGGCATCCACGGCAGCAGTTCTACCTTCCGCAGCTCCCTGAGCAGTGACTTTGACCCCCTGGTGTACTGCAGCCCTGAAGGGGAGCACCGGGGGGAGGAGGCTCAGCCTAGCATGACCTCTCGGCCCCGTTCTTTGGACTCAGTGGTGCCCACAGGGGAAACSCAGGTTTCCAGCCATGTCCACTACCACCGCCACCGGCACCACCACTACAAAAAGCGTTTCCAGTGGCACGGCAGGAAGTCTGGCCCAGAAACTGGAGTCCCGCAATCCAGGCCTGCCATTCCTCGGACGCAACTCCAGCCAGAGCTGCCTTCACCCGATCCGCAAGCAGCCAGATCCAACCCAGCAGCCCCGTCAGGACAGCTCCCCAACCCACAACGGCCCAGGGCCCTCACCGAGCCAGCCCCTGGGCCAGCTGACGCCTCCAGCCCCAGCCCTGGTCCCAGCAGCCTCTTCCACTTGCAGAAATCCAGCCTCTCTGTCCGACACACACAGAGGAAACGGCGGGGGAGTCCCTCAGAGCCCTCCCCAGCCTCTCGACCCCAGGACTTGACTGCACACCGAGTGTGCCAGATTCTTCCCCATTATGGCCCCAGCCTGGCATATCCTTGGTCCCCAGAGGCCCACCCATTGATCTTTGGACCTCCGGGCCCAGACAGGAGGCTGCTACCAGAAACCCCAGGCCCTACTTACCCAAGTTCACAGCCGGTGTGGTTGTGTCTGACTACACGCCAGCCCCTAGGACCACACCCATCTGGGGAGGGGCCTTCCGAATGGAGTTCTGGCACCCCAGAGGGTAGGCCATGCCCTTACCCACACTGCCAGGTGCTGCCAGCCCAGCCTGGCTCAGAAGACGAGCTCGAGGAGCTGTGTGAACAGGCCGTGTGA

Related Sequences

bmy_03549T0 Protein

Length: 700 aa      View alignments
>bmy_03549T0
SHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCLSLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTRPVVLIWGNDAEKLMEFVYKNRKAYVRIELKEPPTWPDYDVWILLTVVGTIFVVILASVLRIRCRPRHNRPDPLQQRTAWAISQLATRRYQPGCRRARAEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGDSLSQSLGPSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLSGPSRSAAARPTRPGPFLPSQEPGVGPRHHRLPRSTHPXAPGAPQRLAVAQSPSAQGWGLSNLRCTLQHPATCPMPPRRARPHDSSGSGESYCTEHSGYLADGPASDSSSGPCHGSSSDSVVNCTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGEHRGEEAQPSMTSRPRSLDSVVPTGETQVSSHVHYHRHRHHHYKKRFQWHGRKSGPETGVPQSRPAIPRTQLQPELPSPDPQAARSNPAAPSGQLPNPQRPRALTEPAPGPADASSPSPGPSSLFHLQKSSLSVRHTQRKRRGSPSEPSPASRPQDLTAHRVCQILPHYGPSLAYPWSPEAHPLIFGPPGPDRRLLPETPGPTYPSSQPVWLCLTTRQPLGPHPSGEGPSEWSSGTPEGRPCPYPHCQVLPAQPGSEDELEELCEQAV*