Part of scaffold_106 (Scaffold)

For more information consult the page for scaffold_106 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAPLN ENSTTRG00000009297 (Bottlenosed dolphin)

Gene Details

papilin, proteoglycan-like sulfated glycoprotein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008819, Bottlenosed dolphin)

Protein Percentage 80.36%
cDNA percentage 82.45%
Ka/Ks Ratio 0.3783 (Ka = 0.0293, Ks = 0.0773)

PAPLN ENSBTAG00000011680 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015505, Cow)

Protein Percentage 82.68%
cDNA percentage 86.65%
Ka/Ks Ratio 0.23738 (Ka = 0.0976, Ks = 0.411)

PAPLN  (Minke Whale)

Gene Details

papilin, proteoglycan-like sulfated glycoprotein

External Links

Gene match (Identifier: BACU010792, Minke Whale)

Protein Percentage 91.93%
cDNA percentage 93.64%
Ka/Ks Ratio 0.40133 (Ka = 0.0525, Ks = 0.1308)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4047 bp    Location:796163..761466   Strand:-
>bmy_03573
GGCGTTCCGGGCGGCCTGGCCGACCTCCCAGACTTGTTGGGCTGGGGCGGGCACCCACGGAGTGGCCCCGCCGGCCCCGCGCGCCCGGGGCTCCGGGAGACAGGCCAGGCCGAGATGCGGCTGCTGCTGCTCGTGCCTCTGCTGCTGGCCCCGGCGCCCGGGTCCTCGGCTCCCAGGGTGAGGCGGCAGAGTGACACCTGGAGCTCCTGGGGCAACTGGAGCCCTTGCAGCCGGACCTGTGGAGGGGGCGTCAGCTTCCGGGAGCGCCCCTGCTACTCCCAGAGGAGAGATGGGGGCTCCGGCTGCGTGGGCCCCTCCCGGAGCCACCGCTCTTGCCGCCCCGAGAGCTGCCCCGACGGCGCCCGCGACTTCAGGGCGGAGCAGTGCGCCCAGTTCGACGGCCAGGAGTTCCAGGGGCGGCGGTACAAGTGGCTGCCCTACTACGGCGCCCCAAACAAATGTGAACTGAACTGCATTCCCAAGGGGGAGAGCTTCTACTACAAGCACAGGGAGGCCGTCATAGACGGGACACCCTGCGAGCCTGGCAAACGGGACATCTGCGTGGATGGCAGCTGCCGGGTTGTCGGCTGTGACCACAACCTGGACTCGTCGAAGCAGGAGGACAAGTGTCTGCAGTGCGGGGGTGATGGCACGACCTGCTACCCCGTCACAGGCGTCCTTGATGCCAATGACCTCAGCAGAGGCTACAACCAGATCCTCATAGTTCCCGTGGGGGCCACCAGCATCCGCATTGAGGAGGCGGCCGCCAGCAGGAATTTCCTGGCGGTGAAGAGCATCCGTGGTGAATACTACCTCAACGGGCACTGGACCATCGAGGGCGCCCGGGCCCTACCTGTGGCCAGCACCGTCCTGCACTATGAGCGGGGAGCTGAGGGGGACCTGGCGCCCGAGCGGCTCCACGCCCGCGGCCCCACCTCGGAGCCCCTGATCGTCGAACTCATCAGCCAGGAGCCCAACCCTGGCGTGCACTTCGAGTACCACCTGCCCCTGAGCACCCCCCGGCCCGGCTTCAGCTGGAGCCACGGCTCGTGGGGCGACTGCAGCGCCACGTGTGGTGGAGGTCAGCAGACCCGCCCGGTGTTCTGCACCATCGACAATGAGGTCTACCCCGAACACCTGTGCCGGCACCGGCCGCAGCCGGCTGACCGCCGACCCTGCAGCCCTCAGCCCTGCCCACACACCAAGCGGTCCTTGGGCCCCACGGCCAGGAAGGGCCACTCCCCACTTGGCTGGAAGACGGGGCCCTGGACGCCCTGCTCGGCCTCCTGTGAGGGCGGCTCCCAGTCCCGCACTGTCTACTGTGTCTCATCTGATGGCGCCGGCGTCCAGGAGGCTGCTGAGGACGCCGAGTGTGCGGCCCTGCCTGAGAAGCCCCCTACCACGCAGGCCTGCAACCTGCAGCACTGCACAGCCTGGAGCGCGGAGCCCTGGGGCGAGTGCTCTGTCAGCTGCGGCGCCGGGGTCCGGAGGCGGACCGTCACCTGCCGGGGTGACGAGGGGTCTCTGCTCCACGCCACAGCGTGCTCCTTGGAGGACCGTCCCCCCCTCACTGAGCCCTGTGTGCATGACAGCTGTCCCCCCCTCAGTGACCAGGCCTGGCACGTAGGCGCCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGAGGCGCCAGGTGGTCTGCGCCATTGGCCCGCCCAGCCACTGCGGGAGCCTGCAGCCATCCAGGCCTGCGGATGTGGAGCCCTGTAACACGCAGCCCTGCCATGTTCCTCCAGAAGTCCCCAGCATGCAGGACATGCACACCAGCCCCAGGGACCCGTGGATGTCTCTGGGCCCACGGGAGGCCCCCGCCTCAGATTTCAGAGACCAGTGGTGGGCACCCCAGGAGCAACCCTCAGCTCAGGGTAACCCCAGAGGCGACCAGAACCCACACCTGCCAGCCCCGGGCCCAGCCCCATCTCTGCGGCACTCCTCACACCGGCAGCCCCTGCGGTCTGGCTTGGCGCCCCGTGACTGCAGACACAGCTCCCATGGGTGCTGCCCCGATGGCCACACTGCGTCTCTTGGGCCGCAGTGGCAAGGCTGCCCGGGGGCCTCATGTCAGCAGAGCAGGTTCGGGTGCTGTCCTGACGGGGTGTCTGTGGCTGAGGGGCCCCATCAGGCTGGCTGTGCGAGCAATTATGGACGCGACAACACCGGGAGCAGGCCACGGTCGAGAGAGGTGGCTTCCACAGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCTCCCAGTTCGGCTGTTGCTATGACAACATGGCCTCTGCGGCGGGACCTCTTGGGGAAGGCTGTGTGGGCCAGCCCAGCTACATGTACCCCGTGCGGTGCCTACTGCCCAGCGCCCATGGCTCCTGCATGGACTGGGCCGCCCGCTGGTACTTCATCGCCTCCGTGGGCCAGTGTAACCGCTTCTGGTATGGTGGCTGCCATGGCAACGCCAATAACTTTGCCTCGGAGGAGGAGTGTGTGAGCAGCTGCCGGGGACCCCAACATGAGCCCCGCCGACACGACCCCGGGGCCTCTGGCCAAAGCACCCATAGAGACAGTGGCGGCAGCAGTCCTGGGGGCCAGCAGGAGGCCAGCCGGCACGGGACGGGGCCTGTGGTCCAGAGAAAGCCCTTGCCTTCCGGTGGCCTGTGGTGGCGAGATCAAGATCCTGGGCCGGGGGCCGTGGACCACAGACAGGCCTTTGGAGAAGGGCCCCAGGGCCAGGAGCTTGGGCCCAGTGCCCCTGGACTGGGCGGAGACACAGGACCACCAGCGCCACCTTCCCACAGCTCCTCCTACAGGATCACCCTGGCAGGCTCGGAGCCCTCCCTGGTACAGGCGGCCCTGGGGCAGCTGGTGCGGCTCTTCTGCCCAGATGACAGCTCCCTGGACGCCCACGCCAGGTGGCAGAAAGACGGGCGGCCCATCTCCTCTGCCAGGCACCAGCTGCAGCCCGATGGCTCCCTGGTCATTAGCCCCCTGTGGGCAGAGGATACTGGCACCTACAGCTGTGGCAGCACCAGGCCAGACCGTGACTCTCAGAAGATCCAGCTTCGCATCACAGGGGGTGATGTGGCTGTGCTTCCTGAGGCTGAACCAAGGCACTTCCCTCAGACCAGGGACCCAGCCCAGGGCCACAGTCCTCAGGACCGCAGCCTAGGGGGCGGTTCTGGGGGCCGGGGGGCCGTCTCCTCCTCGCACCCACGGCCCACGAGCAGGCTGCGTCTGGACCGGCACCAGCCTGGGGTGGTGGACGCCCATCCAGGCCAGCGGATCCGGCTGACCTGTCGTGCCGAGGGCTTCCCACCGCCAAGCGTCGAGTGGCAGAGAGATGGGCAGCCCCTCTCTTCCCCCAGACACCAGCTGCAGTCTGACGGCTCCCTGGTCATCAGCCGCGTGGCTGTGGAAGATGGAGGCTTCTATACCTGTGTTGCAGTCAACGGGCAGGACCGAGACCAGCGCTGGGTCCAGCTCAGAGTTCTGGGGGAGCTGACAATCACAGGGCTGCCCTCTACGGTGATGGTGCCAGAAGGTGACACGGCCAGGCTGCTGTGTGCGGTGGCGGGCGAAAGCGTGAACATCAGATGGTCCAGGAACGGGCTGCCGGTGCGGGCCGACGGCCACCGTGTCCACCAGTCCCCGGATGGCACACTGCTGATCCACAACCTGCGGGCCAGGGACGAGGGCTCCTACACGTGCAGCGCCTACCGTGGAAGCCAGGCGGTCAGCCGCAGCACCGAGGAGGAAACCAGCAGTGAAAGAGAGAACACAGCCTTTGCCGACTCAAAATTGTGCTTAGGGCTGACCCTGCTCTCTCTTCTGCCCCATCCAGAGGCTGCAACAGTGTCGTCCAGCTCTTCAGGTCTCAACGCACTGGCCACCGCGCCGAGGGACCCCAGGAGGGAGTGCATCGACCAGCCGGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTCTGCGGCAATGAGTACTACTCCAGCTTCTGCTGTGCCAGCTGTTCCCGTGTCTAG

Related Sequences

bmy_03573T0 Protein

Length: 1349 aa      View alignments
>bmy_03573T0
GVPGGLADLPDLLGWGGHPRSGPAGPARPGLRETGQAEMRLLLLVPLLLAPAPGSSAPRVRRQSDTWSSWGNWSPCSRTCGGGVSFRERPCYSQRRDGGSGCVGPSRSHRSCRPESCPDGARDFRAEQCAQFDGQEFQGRRYKWLPYYGAPNKCELNCIPKGESFYYKHREAVIDGTPCEPGKRDICVDGSCRVVGCDHNLDSSKQEDKCLQCGGDGTTCYPVTGVLDANDLSRGYNQILIVPVGATSIRIEEAAASRNFLAVKSIRGEYYLNGHWTIEGARALPVASTVLHYERGAEGDLAPERLHARGPTSEPLIVELISQEPNPGVHFEYHLPLSTPRPGFSWSHGSWGDCSATCGGGQQTRPVFCTIDNEVYPEHLCRHRPQPADRRPCSPQPCPHTKRSLGPTARKGHSPLGWKTGPWTPCSASCEGGSQSRTVYCVSSDGAGVQEAAEDAECAALPEKPPTTQACNLQHCTAWSAEPWGECSVSCGAGVRRRTVTCRGDEGSLLHATACSLEDRPPLTEPCVHDSCPPLSDQAWHVGAWGLCSKSCSSGTRRRQVVCAIGPPSHCGSLQPSRPADVEPCNTQPCHVPPEVPSMQDMHTSPRDPWMSLGPREAPASDFRDQWWAPQEQPSAQGNPRGDQNPHLPAPGPAPSLRHSSHRQPLRSGLAPRDCRHSSHGCCPDGHTASLGPQWQGCPGASCQQSRFGCCPDGVSVAEGPHQAGCASNYGRDNTGSRPRSREVASTAQQNEPSECRGSQFGCCYDNMASAAGPLGEGCVGQPSYMYPVRCLLPSAHGSCMDWAARWYFIASVGQCNRFWYGGCHGNANNFASEEECVSSCRGPQHEPRRHDPGASGQSTHRDSGGSSPGGQQEASRHGTGPVVQRKPLPSGGLWWRDQDPGPGAVDHRQAFGEGPQGQELGPSAPGLGGDTGPPAPPSHSSSYRITLAGSEPSLVQAALGQLVRLFCPDDSSLDAHARWQKDGRPISSARHQLQPDGSLVISPLWAEDTGTYSCGSTRPDRDSQKIQLRITGGDVAVLPEAEPRHFPQTRDPAQGHSPQDRSLGGGSGGRGAVSSSHPRPTSRLRLDRHQPGVVDAHPGQRIRLTCRAEGFPPPSVEWQRDGQPLSSPRHQLQSDGSLVISRVAVEDGGFYTCVAVNGQDRDQRWVQLRVLGELTITGLPSTVMVPEGDTARLLCAVAGESVNIRWSRNGLPVRADGHRVHQSPDGTLLIHNLRARDEGSYTCSAYRGSQAVSRSTEEETSSERENTAFADSKLCLGLTLLSLLPHPEAATVSSSSSGLNALATAPRDPRRECIDQPELANCDLILQAQLCGNEYYSSFCCASCSRV*